Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq35672 95.1 1e-14 >seq35672 Length=222 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | || || || || ||||| |||||||| || | || || Sbjct 7 CGCAAGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGACAGAGTTCGGCCG 66 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || | ||| || || || |||| |||||||| ||||| || || | ||| || || Sbjct 67 TCCTCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTG 126 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| |||| | || | ||||||| | ||||| || || || ||| Sbjct 127 TCCTGGATCTTTGCCTTCACATTCTCGATGGTGTCTGACGGCTCAACATCAAGCGTGATA 186 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || ||||| ||||||||||| ||||| Sbjct 187 GTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCAT 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424746095632320