Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1361 86.0 1e-11 seq1294 86.0 1e-11 seq1092 86.0 1e-11 seq1073 86.0 1e-11 seq997 86.0 1e-11 seq923 86.0 1e-11 seq927 84.2 5e-11 >seq1361 Length=46268 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| || ||||||| || |||||| ||||||||||| Sbjct 17046 CCCGTCTAGCTCAGTCGGTAGAGCGCTAGCCTTTTAAGCTAGTGGTCAAGGGTTCGAGCC 17105 Query 165771 CCACGATGGG 165780 || | |||| Sbjct 17106 CCTTGGTGGG 17115 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| || ||||||| || |||||| ||||||||||| Sbjct 17345 CCCGTCTAGCTCAGTCGGTAGAGCGCTAGCCTTTTAAGCTAGTGGTCAAGGGTTCGAGCC 17404 Query 165771 CCACGATGGG 165780 || | |||| Sbjct 17405 CCTTGGTGGG 17414 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| || ||||||| || |||||| ||||||||||| Sbjct 19468 CCCGTCTAGCTCAGTCGGTAGAGCGCTAGCCTTTTAAGCTAGTGGTCAAGGGTTCGAGCC 19527 Query 165771 CCACGATGGG 165780 || | |||| Sbjct 19528 CCTTGGTGGG 19537 >seq1294 Length=42813 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| || ||||||| || |||||| ||||||||||| Sbjct 26279 CCCGTCTAGCTCAGTCGGTAGAGCGCTAGCCTTTTAAGCTAGTGGTCAAGGGTTCGAGCC 26220 Query 165771 CCACGATGGG 165780 || | |||| Sbjct 26219 CCTTGGTGGG 26210 >seq1092 Length=33764 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| || ||||||| || |||||| ||||||||||| Sbjct 31075 CCCGTCTAGCTCAGTCGGTAGAGCGCTAGCCTTTTAAGCTAGTGGTCAAGGGTTCGAGCC 31016 Query 165771 CCACGATGGG 165780 || | |||| Sbjct 31015 CCTTGGTGGG 31006 >seq1073 Length=51318 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| || ||||||| || |||||| ||||||||||| Sbjct 29365 CCCGTCTAGCTCAGTCGGTAGAGCGCTAGCCTTTTAAGCTAGTGGTCAAGGGTTCGAGCC 29424 Query 165771 CCACGATGGG 165780 || | |||| Sbjct 29425 CCTTGGTGGG 29434 >seq997 Length=30465 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| |||||||||||||||||||| ||||| ||||||| |||||| |||||||| Sbjct 27055 TTGCCCGCTTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCAGGGGTTCGA 26996 Query 165768 GCCCC 165772 ||||| Sbjct 26995 GCCCC 26991 >seq923 Length=53282 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| || ||||||| || |||||| ||||||||||| Sbjct 49762 CCCGTCTAGCTCAGTCGGTAGAGCGCTAGCCTTTTAAGCTAGTGGTCAAGGGTTCGAGCC 49821 Query 165771 CCACGATGGG 165780 || | |||| Sbjct 49822 CCTTGGTGGG 49831 >seq927 Length=8200 Score = 84.2 bits (92), Expect = 5e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| || ||||||| || |||||| ||||||||||| Sbjct 2678 CCCGTCTAGCTCAGTCGGTAGAGCGCTAGCCTTTTAAGCTAGTGGTCAAGGGTTCGAGCC 2737 Query 165771 C 165771 | Sbjct 2738 C 2738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057796662852710