Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011
-07-18] 2,017 sequences; 48,799,969 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1353 154 2e-32
>seq1353
Length=60684
Score = 154 bits (170), Expect = 2e-32
Identities = 379/566 (67%), Gaps = 14/566 (2%)
Strand=Plus/Minus
Query 16216 ATGTAGTCCTTCGTCTCTGCTGATA--AGTTCGTTGGAAAAAGTTAACCCTGGCATTTTT 16273
||||| |||||||||||| ||||| | ||| || ||||||||||| || ||||||
Sbjct 30116 ATGTAATCCTTCGTCTCT--TGATATTAATTCATTTGAAAAAGTTAAACCAGGCATTAAA 30059
Query 16274 CCTCGTTTCTTTAACCAGAATAT--CGCAGCAAATGACCCCGAAAAGAATATACCCTCAA 16331
|| ||| || | ||| || || ||||| || | | | ||| ||| || || ||||
Sbjct 30058 GATCTTTTTTTAAGCCAAAAAATGGCGCAGAAACTTCCACTGAA--GAAGATTCCTTCAA 30001
Query 16332 CAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCT 16391
|| |||||| || | |||||| ||| | | ||| |||||| ||||||||
Sbjct 30000 TAGCTGCAAATGCAACTAATCGAGAAGCGAAATTGTCATTATTATTA---ATCCATTTTA 29944
Query 16392 GTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCT 16451
|||||| ||||||| ||||| | || || || ||||| | ||
Sbjct 29943 AAGCCCATTAAGCTTTTTTATTTATTACAGGAATATTTAGACAAGCTTTAAAAAGAAACT 29884
Query 16452 CTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTA 16511
||||||| | | ||| ||||||| ||||| || | |||| || |||| || || |
Sbjct 29883 CTTTTTCATTATCATCTTTTATATAAGTATCTATTAATAAAGAATAAGTTTCGGAATGAA 29824
Query 16512 TGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC-C 16570
| || || || ||||| | |||||||||||| || || || | |||| ||||| |
Sbjct 29823 TATTTTCCATAGCTATTTAAAATCCATAGAAAGCTCTTGCTTCTGGAATTTAAACTTCAC 29764
Query 16571 ACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCC 16630
|| | |||| ||| || | || || || || || || || |||||||| ||
Sbjct 29763 ACAT-AAATTATTCAGCTAAATTTTCTAGAACAATTCCATCTGAAGCTGCAAAAAATGCA 29705
Query 16631 AATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCT 16690
| | | |||||| || | | | ||| || || | | | ||||||||| ||||||
Sbjct 29704 AGAACATACTTAATAAAGTGTCTCTCGCCATCAGTCAATCTTTCCCAATCTTTCAAATCT 29645
Query 16691 TTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTC 16750
| | | ||| | ||| |||| |||||||| ||| | | | ||||| ||||||| |
Sbjct 29644 TAATAAAGATCAATTTCGTCTGCTGTCCAAAATGAAGCGAGTTCTTTTTTGTACATTTCC 29585
Query 16751 CAAATATCATTGTATTGTA-TGGGAA 16775
|| || | ||| |||| || ||||||
Sbjct 29584 CATATTTTATTATATTTTATTGGGAA 29559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511401505964440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |