Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq29 100 5e-16 >seq29 Length=52844 Score = 100 bits (110), Expect = 5e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 135597 TACAGATAAAGACGAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGA 135656 ||||||| || | |||||| |||||| || | || |||||||| |||||||| Sbjct 37057 TACAGATGAAAATGAGTGGGGATAATGGAAATAACGAGGAGACCCTGTTTTACATATAGA 37116 Query 135657 ACTTAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAA 135716 | || | |||||| || ||||| ||||| | || ||| | || ||||| |||||||| Sbjct 37117 TTTAAGAAAATGGGCTCATATTTTTGTTATAACCCCTTTATCAGCTAATACTTTAGCAAA 37176 Query 135717 AATAGCTAATGGTATATGCGATAATTTA 135744 |||| | ||||| ||||| ||||||||| Sbjct 37177 AATAACAAATGGAATATGTGATAATTTA 37204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923173523900680