Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1257 141 1e-28 >seq1257 Length=94337 Score = 141 bits (156), Expect = 1e-28 Identities = 232/326 (71%), Gaps = 20/326 (6%) Strand=Plus/Plus Query 6948 ACCTAATCCCATATCTGCTGATCTTTGATAACAT--TGACAAGATAAAATA---TTGTCT 7002 ||||||||||||||| |||||||| ||| ||| || ||| |||| | || | | Sbjct 33747 ACCTAATCCCATATCACATGATCTTTAATA-CATCATG-CAACTTAAATTTCCTTTATTT 33804 Query 7003 ATAGCATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATA--TCAG 7060 ||| ||||||| | || |||||||||||| |||||| | | | || || || Sbjct 33805 ATA---TAAAATTAGCTCATTACATGACATGGTGGTAAAGC--CATTATACTTAAGTCTT 33859 Query 7061 ATGGATTCCAAGCAGTCA---TTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTG 7117 | |||||||||| | | |||| | || |||||| |||||| |||||| | | Sbjct 33860 TTACATTCCAAGCATTTAATATTAATCTTCGACTATCA---GGATTTTTTTTTATTGTAT 33916 Query 7118 TTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATAT 7177 |||| | || ||||| |||||| || | ||||| ||||| ||| | | ||| | || Sbjct 33917 CAATAAGTTCTTATAATTAATCTATTCCTTTACCTTTATAATCAGTCTTAAAATCTGCAT 33976 Query 7178 AATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCAC 7237 | | ||| |||||||| ||||||| ||| ||||||| || ||||||||||| ||||| | Sbjct 33977 ACTAAGCACCAAAATGCCTCCATTAAAATCCATAAACTGGTCCTAAATCACCCTCTTCCC 34036 Query 7238 GATGATTAAATCCTAATCGATTTAAA 7263 || | ||| |||||| || |||| Sbjct 34037 TATTGTGAAAACCTAATGAATCTAAA 34062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595856976577200