Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011
-07-18] 2,017 sequences; 48,799,969 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1181 116 3e-21
seq1038 107 2e-18
seq892 104 2e-17
>seq1181
Length=100449
Score = 116 bits (128), Expect = 3e-21
Identities = 166/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043
||| |||||| || | || || ||||||||||| || ||| | || || | || || ||
Sbjct 75140 AAAAAAAATGTAAATTTTCGTCAAAACATTAACAGGTAAAACAATCACTTTAGATGTTGA 75081
Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103
||| ||| | || || | || ||| || ||| ||||||||||| || |||||
Sbjct 75080 GGCATCCGATTCAATTGAAAATGTTAAAGCCAAAATTTAAGACAAAGAAGGAATTCCTCC 75021
Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163
||| || | ||||| || | | ||| || || | ||||||| ||||| | ||
Sbjct 75020 AGATTAATAAAGACTTATATTTGCCGGAAAATAATTGGAAGATGGCAGAACTCTTTCAGA 74961
Query 24164 TTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||| || ||| |||||||||| || | |||||||| || ||||| ||||||||
Sbjct 74960 TTACAATATTTAAAAAGAATCCACTCTCCATTTAGTTTTGAGATTAAGAGGAGG 74907
>seq1038
Length=46086
Score = 107 bits (118), Expect = 2e-18
Identities = 168/237 (71%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043
||| |||||| || | ||||| ||||| |||||||||||| | ||||| | || || ||
Sbjct 43836 AAAAAAAATGTAAATTTTTGTTAAAACCTTAACTGGAAAAACTATTACATTAGACGTAGA 43895
Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103
|| || | || || | || ||| |||||| || || ||||| || |||||
Sbjct 43896 AGCTTCTGATTCAATTGAAAACGTAAAAGCCAAGATTTAAGATAAGGAAGGTATTCCTCC 43955
Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGC 24161
||| || | ||| | |||| || || || || | ||||||| |||| || |||
Sbjct 43956 AGATTAATAAAGATTAATTTTCGCAGGAAAATAATTAGAAGATGGAAGAACACTTTCA-- 44013
Query 24162 GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
||||| || ||| |||| || || || | |||||||| |||||||| ||||| |||
Sbjct 44014 GATTACAATATTTAAAAGGAGTCAACTCTCCATTTAGTTTTAAGATTAAGAGGCGGA 44070
>seq892
Length=79579
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||| || | || || ||||||||||| |||||| | || || | || || || || |
Sbjct 46895 ATGTAAATCTTCGTCAAAACATTAACCGGAAAAACAATCACTTTAGATGTTGAAGCTTCC 46836
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||| | || || | |||||| || || ||||||||||| || || || ||| ||
Sbjct 46835 GACTCTATTGAAAACGTCAAAGCTAAAATCTAAGACAAAGAAGGTATTCCCCCAGATTAA 46776
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
| ||||| || | || || || || | ||||| | |||| | || || ||
Sbjct 46775 TAAAGACTTATCTTCGCAGGAAAATAATTAGAAGACGGAAGAACTCTTTCTGACTACAAT 46716
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACT 24220
||| |||||||||| ||| | |||||||| |||||| | |||||||||||
Sbjct 46715 ATTTAAAAAGAATCAACACTCCATTTAGTCTTAAGACTTAGAGGAGGACT 46666
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
|||| || | || || ||||||||||| |||||| | || || | || || || ||
Sbjct 47580 AATGTAAATCTTCGTTAAAACATTAACCGGAAAAACAATCACTTTAGATGTTGAAGCTTC 47521
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||| | || || | |||||| || || ||||||||||| || || || ||| |
Sbjct 47520 CGACTCTATTGAAAACGTCAAAGCTAAAATCTAAGACAAAGAAGGTATTCCCCCAGATTA 47461
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
| | ||||| || | || || || || | ||||| | |||| | || || ||
Sbjct 47460 ATAAAGACTTATCTTCGCAGGAAAATAATTAGAAGACGGAAGAACTCTTTCTGACTACAA 47401
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||| |||||||||| || | |||||||| || ||||| ||||| ||
Sbjct 47400 TATTTAAAAAGAATCAACCCTCCATTTAGTCTTGAGATTAAGAGGTGG 47353
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||| || | || || ||||||||||| |||||| | || || | || || || || |
Sbjct 47123 ATGTAAATCTTCGTCAAAACATTAACCGGAAAAACAATCACTTTAGATGTTGAAGCTTCC 47064
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||| | || || | |||||| || || || |||||||| || || || ||| ||
Sbjct 47063 GACTCTATTGAAAATGTCAAAGCTAAAATCTAAGATAAAGAAGGTATTCCCCCAGATTAA 47004
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
| ||||| || | || || || || | ||||| | |||| | || || ||
Sbjct 47003 TAAAGACTTATCTTCGCAGGAAAATAATTAGAAGACGGAAGAACTCTTTCTGACTACAAT 46944
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||| |||||||||| || | |||||||| || ||||| ||||| ||
Sbjct 46943 ATTTAAAAAGAATCAACCCTCCATTTAGTCTTGAGATTAAGAGGTGG 46897
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||| || | || || ||||||||||| |||||| | || || | || || || || |
Sbjct 47351 ATGTAAATCTTCGTTAAAACATTAACCGGAAAAACAATCACTTTAGATGTTGAAGCTTCC 47292
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||| | || || | |||||| || || || |||||||| || || || ||| ||
Sbjct 47291 GACTCTATTGAAAACGTCAAAGCTAAAATCTAAGATAAAGAAGGTATTCCCCCAGATTAA 47232
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
| ||||| || | || || || || | ||||| | |||| | || || ||
Sbjct 47231 TAAAGACTTATCTTCGCAGGAAAATAATTAGAAGACGGAAGAACTCTTTCTGACTACAAT 47172
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||| |||||||||| || | |||||||| || ||||| ||||| ||
Sbjct 47171 ATTTAAAAAGAATCAACCCTCCATTTAGTCTTGAGATTAAGAGGTGG 47125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429925431232635
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |