Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1314 96.9 3e-15 seq1181 96.9 3e-15 >seq1314 Length=139336 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | || | ||| | || ||||| |||| ||| |||||||| | | || | Sbjct 38388 AATCTCAAAACCAAATGGAGAGTGGATTCCTTTTAAATATTGTAATCAGAAAGAGTTCTG 38447 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 ||||||| | | || || || |||| || | | | || || ||||||||||| Sbjct 38448 CCGTCTTCTAATTATTTACCAGCGAAAATAAGTCTTTATTAATCTGGTGGAATTCCTTCC 38507 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || |||| |||||| ||||||| || | || |||| || || || |||| ||| Sbjct 38508 TTGTCTTAAATTTTTGCCTTTACATTTTCAATTGAATCAGAAGCTTCAACATCTAAAGTA 38567 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | ||| || || || |||||||| |||||||||| |||||| Sbjct 38568 ATGGTTTTTCCTGTTAAAGTTTTAACGAAAATTTACATTTT 38608 >seq1181 Length=100449 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | |||| ||| | || |||||||||| ||| |||||||||| | || | Sbjct 74916 AATCTCAAAACTAAATGGAGAGTGGATTCTTTTTAAATATTGTAATCTGAAAGAGTTCTG 74975 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | ||||| | | || |||||| | || || | | | || ||||||||||||||| Sbjct 74976 CCATCTTCCAATTATTTTCCGGCAAATATAAGTCTTTATTAATCTGGAGGAATTCCTTCT 75035 Query 64346 TTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGT 64404 || |||| | |||| ||||| ||| || | || ||| || || || |||| ||| Sbjct 75036 TTGTCTT-AAATTTTGGCTTTAACATTTTCAATTGAATCGGATGCCTCAACATCTAAAGT 75094 Query 64405 TACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | || || || || || ||||| |||||||||| |||||| Sbjct 75095 GATTGTTTTACCTGTTAATGTTTTGACGAAAATTTACATTTT 75136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499632202705480