Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq861 86.0 8e-12 >seq861 Length=133231 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || |||| |||||| |||| | ||||| ||| || || |||||||| ||| Sbjct 47985 ATAGAAGCCAAATTACATACAGCAATTTCATCTGGTGAAGTATATTCAATAATTTCAGTA 48044 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 |||||||||||||| |||| || ||||| || | || ||| ||| | ||||| ||| Sbjct 48045 CACAAATTTGAACTTCTAATAGTCCCCAAATTTTATTAATTACTTTTTCTATTACAAGCA 48104 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585 || || || | |||||| || || || || || Sbjct 48105 TCTTTATATAACATATAAGGAGTTCCAGTTTC 48136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613491731949720