Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1181 82.4 5e-11 >seq1181 Length=100449 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| || || |||||||| || || | ||| |||||| | ||| || || || ||| Sbjct 74907 CCTCCTCTTAATCTCAAAACTAAATGGAGAGTGGATTCTTTTTAAATATTGTAATCTGAA 74966 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| |||| |||| | ||||||||||||||| |||| || | ||| | || Sbjct 74967 AGAGTTCTGCCATCTTCCAATTATTTTCCGGCAAATATAAGTCTTTATTAATCTGGAGGA 75026 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || ||||| ||| || ||| || | | || || || ||||||||| Sbjct 75027 ATTCCTTCTTTGTCTTAAATTTTGGCTTTAACATTTTCAATTGAATCGGATGCCTCAACA 75086 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | || || ||||| || || | || || || || || | ||| || Sbjct 75087 TCTAAAGTGATTGTTTTACCTGTTAATGTTTTGACGAAAATTTACATTTT 75136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324625619795976