Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1257 167 3e-36 >seq1257 Length=94337 Score = 167 bits (184), Expect = 3e-36 Identities = 299/430 (70%), Gaps = 14/430 (3%) Strand=Plus/Minus Query 104854 CAATAT-TCTTAAAGAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAA 104912 |||||| | |||| || ||| | ||| | || ||||| | || ||| ||| || |||| Sbjct 34168 CAATATATATTAAGGAGTTAATTTGGTTTATAAAAGGATCCACTAATAGTAAATTATTAA 34109 Query 104913 ATGAAATTGGTGTTAAAGTATGGAATGATAATGGTTCACGTA---AGTTTTTAGATTCTT 104969 ||| | || ||||| ||||| ||| || || | ||| ||||||||||||| | Sbjct 34108 GTGATAAAGGGATTAAAATATGGGATGGAAACGG---AAGTAGATAGTTTTTAGATTCAT 34052 Query 104970 GTGGATTTCACTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGAC 105029 || |||||| | | |||| ||||||||||||||| ||||||||||| ||||||| | Sbjct 34051 TAGGTTTTCACAATAGGGAAGAGGGTGATTTAGGACCAGTTTATGGATTTTAATGGAGGC 33992 Query 105030 ATGCTGGAGCTCAATATATCGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAAT 105089 || ||| ||| | ||| || | | | || || |||| || |||| ||||| ||| Sbjct 33991 ATTTTGGTGCTTAGTATGCAGATTTTAAGACTGATTATAAAGGTAAAGGAATAGATTAAT 33932 Query 105090 TAAGTCAAGTTATAGAAACTATAAAAAATAACCCCGGGTGTCGAAGAATAATTATAGATA 105149 || || |||| || || |||||||| || || | |||||||| |||| || || Sbjct 33931 TATAAGAACTTATTGATACAATAAAAAAAAATCCTGATAGTCGAAGATTAATATTAAATG 33872 Query 105150 GTTGGAATGTGTCACAATTATCAG-AT-ATGGCTCTTCCACCGTGTCATTGTTTGGTACA 105207 ||||||||| | | ||| || || |||||| | ||||| |||||| || | Sbjct 33871 CTTGGAATGTAAAAGACTTA--AGTATAATGGCTTTACCACCATGTCATGTAATGAGCTA 33814 Query 105208 ATTTTACATTAGAAATAAAATTTATTTAGATTGTCAATTGTATCAAAGATCTGCAGATTT 105267 |||||| || ||||||| ||||| ||| ||||| ||||||| ||| | Sbjct 33813 ATTTTA---TATAAATAAAGGAAATTTAAGTTGCATGATGTATTAAAGATCATGTGATAT 33757 Query 105268 AGGATTAGGT 105277 ||||||||| Sbjct 33756 GGGATTAGGT 33747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658386600009320