Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1353 307 1e-78 >seq1353 Length=60684 Score = 307 bits (340), Expect = 1e-78 Identities = 518/740 (70%), Gaps = 15/740 (2%) Strand=Plus/Minus Query 37050 tttATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACA 37109 || || ||||||| || || || | || || || |||| |||||| ||| ||| Sbjct 30256 TTCATCCCAATTAATTCAACAGGTAAAGCTTCAGAAATAAATTCTTTTTCAATTTCAACA 30197 Query 37110 GCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGAT--ATTTTAAATATTTAA 37167 || || | | ||| ||||| |||||||||| || | || |||||| || || | Sbjct 30196 GCTTC---AGCGATAATAACATTAACTTCTTCT-TTAGCTAATTTATTTTACATCATTGA 30141 Query 37168 ACAAT--AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGA 37225 || ||||| |||||||| |||||| ||||| ||||| ||| |||||||| || Sbjct 30140 GTAAAGCAAACAAGCAAAATCTGTATGTAATCCTTCGTCTCTTGATATTAATTCATTTGA 30081 Query 37226 AAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA-AAAGATC 37284 ||| ||||| || ||||||||| ||||||||||| |||||| || || ||| ||| || Sbjct 30080 AAAAGTTAAACCAGGCATTAAAGATCTTTTTTTAAGCCAAAAAATGGC-GCAGAAACTTC 30022 Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344 || ||||| || ||||||| ||||||||||| || | || | | ||||| | | Sbjct 30021 CACTGAAGAAGATTCCTTCAATAGCTGCAAATGCAACTAATCGAGAAGCGAAATTGTCAT 29962 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTA-ATTTAACACATTCAATTGTT 37403 ||| || | ||||||||| | ||| | || ||| ||||| ||| ||| || Sbjct 29961 TATTATTA---ATCCATTTTAAAGCCCATTAAGCTTTTTTATTTATTACAGG-AATATTT 29906 Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGT 37463 | ||||| || ||||| | |||||| | | |||| ||||||||||||| |||| | Sbjct 29905 AGACAAGCTTTAAAAAGAAACTCTTTTTCATTATCATCTTTTATATAAGTATCTATTAAT 29846 Query 37464 AAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTA 37523 ||| ||| |||| || ||||||||||| |||||||| | ||| ||||| ||| || Sbjct 29845 AAAGAATAAGTTTCGGAATGAATATTTTCCATAGCTATTTAAAATCCATAGAAAGCTCTT 29786 Query 37524 GCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCA 37583 ||||| | | || ||| || | ||| | |||||| ||||| ||| || ||| Sbjct 29785 GCTTCTGGAATTTAAACTTCACACATAAATTATTCAGCTAAATTTTCTAGAACAATTCCA 29726 Query 37584 TCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAAT 37643 || ||||||||| || ||||||||||| || ||||| ||||| || ||| | ||| Sbjct 29725 TCTGAAGCTGCAAAAAATGCAAGAACATACTTAATAAAGTGTCTCTCGCCATCAGTCAAT 29666 Query 37644 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCC 37703 ||| |||||| || | ||||| | | ||||| ||| || | |||||||| || Sbjct 29665 CTTTCCCAATCTTTCAAATCTTAATAAAGATCAATTTCGTCTGCTGTCCAAAATGAAGCG 29606 Query 37704 AATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCTA 37763 | | | ||| ||||| ||| || | ||||| || |||||| || || |||||||| Sbjct 29605 AGTTCTTTTTTGTACATTTCCCATATTTTATTATATTTTATTGGGAACATAACAAATCTG 29546 Query 37764 TCAGATGATTCTTTAAGAAT 37783 | | ||||| |||||| Sbjct 29545 TTTGGATTTTCTTAAAGAAT 29526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592301866212680