Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1318 89.7 6e-13 >seq1318 Length=152379 Score = 89.7 bits (98), Expect = 6e-13 Identities = 168/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 138173 ATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAA 138232 ||||||| ||| |||||||| || | || || ||||| |||||||| || ||| || Sbjct 144861 ATGTTTTCTTACTCCAATAGGTCCCATTCCCGGTCCTCCTCCTCCATGGGGTATAGCAAA 144920 Query 138233 TGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCA-CATGGTTTTGCTAGAC 138291 || ||||| ||||| | |||||| ||||| || || ||| | | |||| || || || Sbjct 144921 GGTTTTATGCAAATTCAAATGACAGACATCCGCTCC-TAGAAATCCTGGTGATG-TAAAC 144978 Query 138292 CTACCTGTG-CATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350 | | | | |||| | |||||| ||||| | ||||| | || |||| ||| || Sbjct 144979 CCAGTTTAGGCATTCATATTTGCCCCATCCATGTATACTTATCCTCCATAAAAATGCACT 145038 Query 138351 ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410 || | | || | | | || ||||||||| |||| ||| || || ||||||||| Sbjct 145039 ATATCAATAATTTACTTTACTTTACTTTCAAATATACCACTAGTGGAAGGGTATGTAATC 145098 Query 138411 AT 138412 || Sbjct 145099 AT 145100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578983802002840