Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1181 107 2e-18 seq1038 105 6e-18 seq861 96.9 3e-15 seq892 91.5 1e-13 >seq1181 Length=100449 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| |||| |||||||| || || | || || || || |||| || | |||| Sbjct 75118 AAAACATTAACAGGTAAAACAATCACTTTAGATGTTGAGGCATCCGATTCAATTGAAAAT 75059 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || ||| || || |||||||||||||||| ||||| ||| || || | | || ||| Sbjct 75058 GTTAAAGCCAAAATTTAAGACAAAGAAGGAATTCCTCCAGATTAATAAAGACTTATATTT 74999 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| ||| | |||| ||| |||| | |||||||| || ||| |||| ||||| Sbjct 74998 GCCGGAAAATAATTGGAAGATGGCAGAACTCTTTCAGATTACAATATTTAAAAAGAATCC 74939 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || ||| |||| | ||||| Sbjct 74938 ACTCTCCATTTAGTTTTGAGATTAAGAGGAGG 74907 >seq1038 Length=46086 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| | || ||| ||||||| |||| || ||||||||||| | || |||||||| | Sbjct 43843 ATGTAAATTTTTGTTAAAACCTTAACTGGAAAAACTATTACATTAGACGTAGAAGCTTCT 43902 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| |||||| ||||| |||| || ||||| || ||||| ||| || Sbjct 43903 GATTCAATTGAAAACGTAAAAGCCAAGATTTAAGATAAGGAAGGTATTCCTCCAGATTAA 43962 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | || || || || || ||| | | || ||| |||| | |||||||| || Sbjct 43963 TAAAGATTAATTTTCGCAGGAAAATAATTAGAAGATGGAAGAACACTTTCAGATTACAAT 44022 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||| ||||||| || || || || || || || |||| Sbjct 44023 ATTTAAAAGGAGTCAACTCTCCATTTAGTTTTAAGATT 44060 >seq861 Length=133231 Score = 96.9 bits (106), Expect = 3e-15 Identities = 328/502 (65%), Gaps = 8/502 (2%) Strand=Plus/Plus Query 139063 ACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTG 139122 |||||||| | | | |||| || || | || || || || | ||| || || | Sbjct 47967 ACAAATTTTTATAAAGAAATAGAAGCCAAATTACATACAGCAATTTCATCTGGTGAAGTA 48026 Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 ||||| | |||||| | ||||||||| || | || || || ||||||| || ||| Sbjct 48027 TATTCAATAATTTCAGTACACAAATTTGAACTTCTAATAGTCCCCAAATTTTATTAATTA 48086 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTC 139242 ||||||| |||||||||||||| || | |||||| || || |||||||| | || | Sbjct 48087 CTTTTTCTATTACAAGCATCTTTATATAACATATAAGGAGTTCCAGTTTCTATTTAAGAA 48146 Query 139243 TCTATAATGAATTTGAACAAG-TCCCTAGCTTGTATTTGACGCACGTAAAGTT-CGTCGC 139300 || ||||| | ||| ||| || || |||| || || | | || | || | Sbjct 48147 TCAATAAT-ATCTTGCCAAAGTTCTCTGGCTT-TAATTCTTTTTCTTCCTTTTCCTTCTC 48204 Query 139301 GCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGAC 139360 || || || |||||||||| || ||| ||| || | | |||| | | | || Sbjct 48205 TTTCATATTTCTCGTAGAGTTTTTCAAATTCTTCTCCCCAAACATCAGGTAAACCTAAAC 48264 Query 139361 ACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGAT 139420 | | | ||| ||||| | | ||| | | || | || | ||||| || | || Sbjct 48265 ATTCATTAGGGCACATCAAAGTCCAATGTTCATCTGCAATAACTCTTCTCATAAAAATAT 48324 Query 139421 CCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATG--TT 139478 | |||||||| || || | | | ||| | || | | |||| | ||||| || Sbjct 48325 CAGGAATCCATAACGCATAGAAAAGATCTCTTGCTCTTTGCTCTT-CTTTTCCATGATTT 48383 Query 139479 ACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT 139538 ||| || ||| ||||| ||||| ||||| ||||| ||||||| ||| || || | Sbjct 48384 TTTTTTAATTATAA-AAAATCGAAAACATCAGCATGCCAAGGTTCCAAATATATAGCAAA 48442 Query 139539 TGCGCCTTTCCGTTTGCCACCT 139560 || ||||| | |||||||||| Sbjct 48443 TGATCCTTTTCTTTTGCCACCT 48464 >seq892 Length=79579 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| | ||||| ||||||| ||||||| ||||| || || | || || ||||| || Sbjct 47579 ATGTAAATCTTCGTTAAAACATTAACCGGAAAAACAATCACTTTAGATGTTGAAGCTTCC 47520 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | | |||| || ||| || ||| ||||||||||||| || || || ||| || Sbjct 47519 GACTCTATTGAAAACGTCAAAGCTAAAATCTAAGACAAAGAAGGTATTCCCCCAGATTAA 47460 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| || || ||| | | || || |||| | || || || || Sbjct 47459 TAAAGACTTATCTTCGCAGGAAAATAATTAGAAGACGGAAGAACTCTTTCTGACTACAAT 47400 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 ||| |||| ||||| || || || || || ||| |||| Sbjct 47399 ATTTAAAAAGAATCAACCCTCCATTTAGTCTTGAGATT 47362 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||| | ||||| | ||||| ||||||| ||||| || || | || || ||||| || Sbjct 46895 ATGTAAATCTTCGTCAAAACATTAACCGGAAAAACAATCACTTTAGATGTTGAAGCTTCC 46836 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||| | | |||| || ||| || ||| ||||||||||||| || || || ||| || Sbjct 46835 GACTCTATTGAAAACGTCAAAGCTAAAATCTAAGACAAAGAAGGTATTCCCCCAGATTAA 46776 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| || || ||| | | || || |||| | || || || || Sbjct 46775 TAAAGACTTATCTTCGCAGGAAAATAATTAGAAGACGGAAGAACTCTTTCTGACTACAAT 46716 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTT 24915 ||| |||| ||||| ||||| || || || || Sbjct 46715 ATTTAAAAAGAATCAACACTCCATTTAGTCTT 46684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449886256956760