Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011
-07-18] 2,017 sequences; 48,799,969 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq1314 91.5 1e-13
>seq1314
Length=139336
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|||||| ||||||| || |||||||||||||| ||||||||||| | || || |||
Sbjct 38608 AAAATGTAAATTTTCGTTAAAACTTTAACAGGAAAAACCATTACTTTAGATGTTGAAGCT 38549
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||| | | | | ||||| ||| ||| || || ||||| | || |||
Sbjct 38548 TCTGATTCAATTGAAAATGTAAAGGCAAAAATTTAAGACAAGGAAGGAATTCCACCAGAT 38489
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
| | |||||||||| || |||||| | | || |||| || ||| | | || |||
Sbjct 38488 TAATAAAGACTTATTTTCGCTGGTAAATAATTAGAAGACGGCAGAACTCTTTCTGATTAC 38429
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| ||| ||||||| || || | || |||| |||||||| |||| ||
Sbjct 38428 AATATTTAAAAGGAATCCACTCTCCATTTGGTTTTGAGATTAAGAGGAGG 38379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398866994735713
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |