Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1154 457 7e-123 seq703 250 2e-60 seq844 138 8e-27 seq767 122 7e-22 seq1151 118 8e-21 seq1048 105 5e-17 seq861 87.8 1e-11 >seq1154 Length=79492 Score = 457 bits (506), Expect = 7e-123 Identities = 1068/1576 (68%), Gaps = 45/1576 (3%) Strand=Plus/Minus Query 281322 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAG-AGAA--TCTTCCGCGAT 281378 ||| || |||||| | | || ||| ||||| |||||||| |||| |||||| || Sbjct 32413 ATTATTCGGCTTCTTTTACCAATCTATCAAT---ATCTTCAGGAGAAAGTCTTCCTTTAT 32357 Query 281379 TATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAA 281438 |||| ||||| || || || || | || || | |||||||| || || || || | Sbjct 32356 TATTTGTAATGGTGATTTTATTAGTCTTAGAAGTAGCTTTATCAGTTGCTGTGACGTTCA 32297 Query 281439 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 281498 |||||| || |||| | ||| || | |||||| |||| ||| || ||||| | |||| Sbjct 32296 AAATACCGTTCTCATCAATATCGAAGGAGACTTCGATTTAAGGAACACCTCTAGGGGCAG 32237 Query 281499 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 281558 | | ||| ||||| || || ||| | || | || ||||||||||| |||| || || Sbjct 32236 GAGCGATACCTTCTAAGTTGAATTTACCTAATAAATGGTTATCTTTAGTTAATTATCTTT 32177 Query 281559 CACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 |||| ||||| | || || ||| || | | || ||||| | |||||| || || | | Sbjct 32176 CACCTTCGAATACTTAAATGAGT-ACACCGGGTTAGTTATCAGCATAAGTGGTGAAAATT 32118 Query 281618 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCA 281677 ||||||||| |||||| || |||||||| |||| | ||||| | |||| Sbjct 32117 TATGATTTTTTAGTAGGAATAGTAGTGTTTCTTGGGATAAGAACTGTCATGACTTAACCA 32058 Query 281678 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGA-AGTT 281735 || ||||| | || | ||||| |||| |||||| | || | | || || || |||| Sbjct 32057 GCAGTTTCAATTCCCATTGAAAGTGGAGCGACATCCAATAATAAGACATCTTAGACAGTT 31998 Query 281736 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 | | | ||| |||| | |||||| |||| | ||| || ||||| || ||||||| Sbjct 31997 TCTGA--AGTACAACCAGTTAAAATAGCGGCTTAGACAGCTGCTCCATAAGCTACAGCTT 31940 Query 281796 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTC 281855 |||||||||||| || | ||| ||| ||| || ||||| || | | | | | | Sbjct 31939 CATCAGGATTAATAGATCTATTAGGTTCTTTTCCGTTGAAGAATTCTTAGATCATTGAAA 31880 Query 281856 TTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915 | | || ||||| | | |||||||||||||| || | |||||| | | | |||| | Sbjct 31879 TAATTTTGGGAATTCTTGTAGATCCTCCAACTAAGACGACTTCATGAA--TTTAATTTTT 31822 Query 281916 CCAGTTT--TGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCT-AAACAAGT 281972 | || |||||| | ||||||||||| || | || || | || ||| Sbjct 31821 AGAAATTCCGGAATCCTTGAGTACTTTTTCAACTGGAGGGATACATTCTTTGAATTAAGA 31762 Query 281973 CTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGT-GACATTATAATCAATTC-CTTC 282030 | ||| | |||||||||||||| ||||| || | | |||| | |||| ||| ||| Sbjct 31761 AAG-ACATAATTCTTCGAATTTAGGTCTAGAAATATTCAACATGA-AATC--TTCACTTT 31706 Query 282031 GAACAA-AGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 282089 ||| | ||| |||||||| |||| || || ||||| || || | ||| || | Sbjct 31705 CTGCAAGTGCATCGACTTCAATAGTAGCTTAAGCTGAAGATGAGAGAATTCTTTTCGCTC 31646 Query 282090 GTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCT-GTTTTA 282148 ||| ||| || || ||||||| | |||| ||| | || || ||| | | || Sbjct 31645 TTTCGCATTAAGTTCTGAGTCTTCTCATGGCTCTTG--GGTTATCTCTAATATCGATTCC 31588 Query 282149 TAT-TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACC 282207 | | ||| | ||| || || | || || ||| || |||||| |||||||| || Sbjct 31587 TTTCTTTTTTAAGAATTCAGCAGCGCAATATTATACGAGGTTATTATCGAAATCTTCTCC 31528 Query 282208 TCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAA 282267 ||| || | ||||| ||||| || ||| | |||| ||||| || || || | || || Sbjct 31527 TCCTAAATGAGTATCTCCTGCAGTGGCTTTGACTTCGAAAATACCGTCGTCTAAAGTTAA 31468 Query 282268 AAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT--CTTTG 282325 | | ||||| || |||||||| | ||| || ||||| || || ||| | || Sbjct 31467 TAAGGAGACATCGAAAGTACCACCACCTAAATCGAAGATAAGGACGTTTCTTTCACCTTT 31408 Query 282326 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 282385 || | |||||||| | ||| || || | ||||| || || |||||||| |||||||| Sbjct 31407 TCCT--TTTTTATCTAAACCGTAAGCTATGGCAGCTGCGGTGGGTTCATTGATAATTCTT 31350 Query 282386 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 282445 || || || | ||| |||||| || |||||||||||||||| ||||| || || || Sbjct 31349 AAGACGTTTAAACCGGCAATTGAACCGGCATCTTTAGTGGCTTATCTTTAGGAGTCATTG 31290 Query 282446 AAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT--G 282503 ||||| ||||| || ||||| || |||| | | |||| ||| ||| | |||| | Sbjct 31289 AAATAGGCAGGGACTGTAATGACTGCATTTTTAACTTATTT--GGATAAGAAAGCTTCGG 31232 Query 282504 CTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG-GAGAATATTGCTTG 282562 | || | |||||||| | || ||| ||||| |||| ||| | | | | ||| ||| Sbjct 31231 CAACTTCTCTCATTTTAACGAGAACCATAGATGAGATTTCTTCAGCGTGGA-ATTTTTTG 31173 Query 282563 GATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA--ACATTAAT-AACTTTA 282619 ||| | |||| || ||| | ||||||| | || || | ||||||| Sbjct 31172 ATTTCTCCCTTATATTTTATGACAATCTTAGGTTTATCATCAGGACCGGGTTCAACTTTA 31113 Query 282620 AATGGCCAATATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCAATTA 282677 || ||||| |||| || ||| || | ||| | |||||||| | ||| || |||| Sbjct 31112 AAAGGCCATAATTTAATGTCT--TTTTATACTACAGATTCATTAAATTTTCTTCCGATTA 31055 Query 282678 ATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCAT 282737 | || || || ||||| || || || || || || ||| ||| | || || |||| Sbjct 31054 AACGCTTGGCGTCAAAGATTGTGTTTGTAGGGTTTCTTGCTACTTAGTTCTTTGCAGCAT 30995 Query 282738 CTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTT 282797 |||| || | ||| || || || |||| |||||||||||| || || | |||||||| Sbjct 30994 CTCCGATTAATCTTTCAGTTTCGGTGAATGCAACATATGATGGGGTAGTTCTATTACCTT 30935 Query 282798 GATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTG 282857 | || || ||||| ||||| || || | || |||| || |||||| | |||| | Sbjct 30934 GGTCGTTTGCAATGATTTCTACCTTGTCGTTCATGAATACTCCGACACAAGAATAAGTAG 30875 Query 282858 TTCCTAAATCAATACC 282873 |||| | ||| ||||| Sbjct 30874 TTCCGAGATCGATACC 30859 >seq703 Length=10631 Score = 250 bits (276), Expect = 2e-60 Identities = 1030/1600 (64%), Gaps = 61/1600 (4%) Strand=Plus/Plus Query 281306 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 281365 |||||| ||| | || || | || ||||| | |||| || |||| |||| ||| Sbjct 5032 TTATCTTATTCAGCGAACTCGTCTGCATCTCTTAACATTTAATCGATTTCTTCTTAAGAA 5091 Query 281366 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTT----GTTGATTTATC 281421 | |||||| | |||||||||||| | ||| | ||| | | || || || Sbjct 5092 AGTCTTCCTTTGTCATTAGTAATAGTGA----CTTCGTTTTTAATACCAGCCGACTTTTC 5147 Query 281422 AGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGG 281481 | || | || | | ||||||||| ||| | || || ||||||||||| | ||| Sbjct 5148 ATTAGCCGATACTTACAAAATACCATTAATATCGATTTCGAAAGTGACTTCAATCTAAGG 5207 Query 281482 GACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATC 281541 ||||| |||| || || || |||| ||| || | |||| |||||| Sbjct 5208 TTATCCTCTGGGAGCTTTAGGAATACCCGATAAATCGAATTAACCTAATTTATGATTATC 5267 Query 281542 TTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGA 281601 |||||| | || ||| || || || || ||||| ||| ||||||||||||| | Sbjct 5268 TTTAGTCATAGGTCTTTCTCCTTCAAATATAGAAATAGTGACTGTAGTTTGATTATCTTA 5327 Query 281602 ATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATT 281661 |||||| |||||| | ||| ||| ||| | | ||| |||||||| Sbjct 5328 ATAAGTAGTAAATGTTTAACTTTTCTTAGTAGGGAAAACACTTCCTCTGGGTATAATATT 5387 Query 281662 GGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 281721 |||| | || || | ||||||| ||| | ||| | |||||| |||||| | || Sbjct 5388 ACTCATGACTCCTCCTACAGTTTCTATACCTAAAGATAAAGGAGTAGCATCAATAATAAC 5447 Query 281722 AATATTTTGAAGTT-TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780 | | ||| | || ||| | || | ||| ||| || ||| | |||||| | Sbjct 5448 TAAACTTTCAGTTTCTTTGCTTTCTTCTCCGCACAT-AATTCCTCCTTAGACAGCAGCTC 5506 Query 281781 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 281840 | | || || |||||||| ||||| | | ||||| | ||| || ||| ||| Sbjct 5507 CGAAAGCCACTGCTTCATCTGGATTGATTCCTGTATTTACATCTTTCCC---GAAGTAAT 5563 Query 281841 TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 281900 | | | ||||| ||||| |||||||| | || || ||||| |||||||| ||||| | Sbjct 5564 CTTATACAAGTTTTCTTATTTTAGGAATTCTAGTGGAACCTCCTACTAATACGATTTCTT 5623 Query 281901 GCACCTGTGATTTATCCAGTTTTGAATCC--AAT-----AAAACTTTTTCAACGGGTTCA 281953 | | | |||| | |||||| || ||| | | | ||| || ||| | Sbjct 5624 CGA--TTTCATTTTT-----TTTGAAACCCGAATCTTCCATAGCAGTTTATACTGGTCCT 5676 Query 281954 AGACCAGCTCTAAACAAG-TCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC 282012 | | ||| | ||| || | | ||| |||||||| |||||||| | | Sbjct 5677 A-ATGTTTTCTTGAAAAGATCGTTATTTAATTCCTCGAATTTTGCTCTAGTTAATTCTTC 5735 Query 282013 ATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA--- 282069 || |||| | |||||| | |||| || | |||||| | | |||| || Sbjct 5736 ATCGAAATCTAATCCTTCAACCAAATCTTCGATTTCAATTCTCGA---AGTCATAGTGTT 5792 Query 282070 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT-TGCTG 282128 ||||||| | ||| || ||| | || | | ||| || || ||| | | | Sbjct 5793 AGATAGTCTTCTTTTGGCGTTTTCGACTTCTCTTTTAAGTTTTTATATAGCTCTCTTGTC 5852 Query 282129 ATT-GATTCAAATCTGTTTTATATTTTCTCTTGA--AATCTTCAACACACCATGTTACAA 282185 ||| ||| | ||| | || | || |||||| ||| | ||| || | || Sbjct 5853 ATTAGAT--ATGTCTTTATTGTGCTTCTTCTTGATTAATTT----CACGAAATAGTCCAT 5906 Query 282186 GACGAT-TA-TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTG 282243 || | || ||||||||| | ||||| || | ||| | ||| || || ||| |||| Sbjct 5907 AACTCTCTAGTCAAAATCTGCTCCTCCTAAATGAGTGTCTCCGGAAGTGGCTACGACTTC 5966 Query 282244 GAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAA 282303 |||| |||||| || | || | || || |||||| || |||||||||| ||| || Sbjct 5967 AAAAACTCCATCATCTATAGTTAGAATAGATACATCAAAAGTACCACCACCCAAATCGAA 6026 Query 282304 AATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGC 282363 | || | ||| ||||| ||| ||||| || | |||||| || | ||| || || Sbjct 6027 TACTAGAATGTTCTTTTCTC---CTTTCTTTTTGTCTAAACCATATGCTATAGCTGCTGC 6083 Query 282364 AGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 282423 || |||||||| | |||||||| ||||| | ||| || || | || ||||||||||| Sbjct 6084 TGTGGGTTCATTTAAGATTCTCAATACATTCAAACCTGCGATAGTACCCGCATCTTTAGT 6143 Query 282424 GGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTC 282483 || ||||| || || |||||||| |||||||| || | || || | | | ||||| Sbjct 6144 ACTTTATCTTTATGCGTCATTAAAATAGGCAGGAACTGTCACTACAGCGTTTTTAACTTC 6203 Query 282484 TTTTCCAATATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 282541 | |||| || || | || || ||| |||||| ||| | | | ||| | || ||| Sbjct 6204 TCTTCC--TAAAAATGTTTCAGCGATTTCTTTCATCTTAGTAAGTACCATAGCCGATATT 6261 Query 282542 TGTTCTG--GAGAATATTGCTTGGATTC-ATTTTGATAT--GATACTTCAAAATATGGTT 282596 | ||| | | ||| | | || | ||| ||| | || ||||| || |||||||| Sbjct 6262 TCTTCAGCTGCGAAAACT--TTAGTTTCTCCTTTAACATTCTATACTCTAATATATGGTT 6319 Query 282597 TATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGT 282656 || | || || || || | | || |||| |||| | | || ||| | Sbjct 6320 TACCATTTTTATCAACAAGTTCATAAGGAAGGAATTTTTTATCATACTATACTGTTTTAT 6379 Query 282657 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTG 282716 || |||| | | ||||||||||| || ||||| ||| || | || || ||| | Sbjct 6380 CAGTAAATTTACGACCAATTAATCTCTTAACATCATAAAGGGTTCTAGTAGGGTTATTTA 6439 Query 282717 CAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATG 282776 |||| | | ||| |||| ||||| || | | ||||| || ||||||| || || Sbjct 6440 CAGCCTAGTTTTTAGCTGATTCTCCTATTAAACGTTCTTCGTCGGTAAATGCGACTACTG 6499 Query 282777 ATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATA 282836 |||| || | ||||||||||| ||||| | ||||||||| |||| ||| || | ||| Sbjct 6500 ATGGGGTAATACGATTACCTTGTTCATTGGGAATAATTTCTACTTAACCGTTCTTGAATA 6559 Query 282837 CACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 |||||||||| | | |||||||||||||| ||||| || Sbjct 6560 TACCTACACAAGAATAGGTTGTTCCTAAATCTATACCGAT 6599 >seq844 Length=110932 Score = 138 bits (152), Expect = 8e-27 Identities = 145/188 (77%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 282333 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392 |||| || | ||||| || |||||||| ||||| ||||| ||||| ||||| ||| Sbjct 103493 TTTTTTCTAAGCCATAAGCCAAAGCAGCTGCAGTAGGTTCGTTAATGATTCTTTTTACAA 103552 Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452 | ||| |||||| |||||||||||| || |||||||||| | |||| || ||||| | Sbjct 103553 CTAAACCTGCAATTTGTCCTGCATCTTTTGTTGCTTGTCTTTATTAATCATTGAAATAAG 103612 Query 282453 CAGGAACAGTAATAACGGCATCTGTTACT-TCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 |||| |||||||| ||||||| | ||| | ||||| |||| |||| ||||||| | Sbjct 103613 CAGGGACAGTAATTACGGCAT-TCTTAATGTCTTTACCAAGGTAAGAATCGGCTGTTTCT 103671 Query 282512 TTCATTTT 282519 |||||||| Sbjct 103672 TTCATTTT 103679 Score = 129 bits (142), Expect = 4e-24 Identities = 418/638 (66%), Gaps = 36/638 (6%) Strand=Plus/Plus Query 281272 TTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTT--ATCTGCTTCTTCAAATTCTTTA 281329 |||||||||| |||||| || | | ||||| || |||| |||||| | | || | Sbjct 102444 TTCATTTTTAAGGTCAACA--AGTTCTCTTCTTTTTTAATCTTCTTCTTTATTATTTTCA 102501 Query 281330 GCTTCTCTAATCATTCTCTCAATTTGA-TCTTCAGAGAATCTTCCGCGATTATTAGTAAT 281388 |||||||||||||| ||||||| | |||| ||| | | || | | ||| ||| Sbjct 102502 GCTTCTCTAATCATATCATCAATTTAAGTCTT-AGAAAGACCACCAGAACT-TTA--AAT 102557 Query 281389 AGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAAGAATACC 281445 | || || | |||| ||| ||| |||||| ||| | |||| | ||||| Sbjct 102558 AACAACGTTTT---ATTTTTTTCCAGTTCCTTTATCTAAAGCACTAACATGGACTATACC 102614 Query 281446 ATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGAT 281505 | | ||| | ||| || ||||||||||||| ||| || ||| | | ||||| | || Sbjct 102615 ACTTTGATCGATATCGAAAGTGACTTCAATTTAAGGTACACCTTTAGGGGCAGGGGCAAT 102674 Query 281506 CCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT---TCACC 281562 | |||||| |||| || | | | ||||| || || | | || || || Sbjct 102675 ATCAGCCAAATCAAATTAACCTAAAATTTTATT---TTGAGCAACCATAGGTCTCTCTCC 102731 Query 281563 CTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGA 281622 | ||||| | || | ||||||||||| ||||| | ||| | |||||| || Sbjct 102732 TTAGAAAACTCTAATTGAGACTACAGTTTGGTTATCAGCTGCAGTAGAGAATACTTATGA 102791 Query 281623 TTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGT 281682 |||||| ||||||||||| ||||| ||||| || || ||||| | ||| || || Sbjct 102792 TTTTTTTGTTGGAATTGTTGTATTTCTTTCAATCATCTTAGTCATTACACCTCCGTAGGT 102851 Query 281683 TTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATC 281742 ||| | |||||| | ||| || || ||||| | || | ||| | ||| | | Sbjct 102852 TTCAATACCAAGTGTAAGTGGGGTAACATCTAAAAGAA--------TGACATCTTTTA-C 102902 Query 281743 AGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGG 281802 | || || ||| | | || ||| ||| || |||||| | |||||||||||||| || Sbjct 102903 ACTT---CCTTAAAGGACACCTCCTTAAATTGCTGCACCACAGGCAACAGCTTCATCTGG 102959 Query 281803 ATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTT 281862 |||||| | | ||| | || ||| || |||| | | | | || | ||| | Sbjct 102960 GTTAACACTCTTATTAGGAACCTTTCCA---AAGAAATCTTAGACTATTTTTTAGACCAT 103016 Query 281863 AGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 281900 ||| ||||| | || |||||||| | | || ||||| Sbjct 103017 AGGGATACGGGTAGAACCTCCAACAATAATAACTTCAT 103054 Score = 86.0 bits (94), Expect = 5e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 86111 TTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTA 86170 || |||| || || || | ||| |||||||| ||||| ||||| ||| | ||| ||| Sbjct 103496 TTTCTAAGCCATAAGCCAAAGCAGCTGCAGTAGGTTCGTTAATGATTCTTTTTACAACTA 103555 Query 86171 AACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTG 86230 |||| ||||||| | | ||| ||||||||||| | | ||||| ||||| || | Sbjct 103556 AACCTGCAATTTGTCCTGCATCTTTTGTTGCTTGTCTTTATTAATCATTGAAATAAGCAG 103615 Query 86231 GTACAGTAATAACTGCTTTATTAAT 86255 | |||||||| || || || ||||| Sbjct 103616 GGACAGTAATTACGGCATTCTTAAT 103640 >seq767 Length=84717 Score = 122 bits (134), Expect = 7e-22 Identities = 239/345 (69%), Gaps = 14/345 (4%) Strand=Plus/Minus Query 400273 GCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAA 400332 |||||||| | | ||| || ||||||| || || | ||||| ||||| ||||| ||| Sbjct 48524 GCAGGAACAAGACTTGGAGATTAATGTACTTTATTTGTTACAGAAGGAGACTCAGCAAAA 48465 Query 400333 ACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTT 400392 || | || ||| ||| || | || ||||||||||| | | ||| |||||||| | Sbjct 48464 GCACTTGCGATGAGTGGAATTGAAGTCGTTGGAAGAGATAAATTTGGTGTTTTCCCTTTG 48405 Query 400393 AGAGGAAAACTTTTGAATGTTAGGGATGCT--AGTCCTaaaaaaaTTGCCGATAATGAGG 400450 | |||||| | | ||||| ||||| ||| ||| |||| |||| | || ||| | | Sbjct 48404 AAAGGAAAGATGCTTAATGTGAGGGAAGCTTCAGT--TAAATAAATAACTGAAAATTAAG 48347 Query 400451 AAATTACAGCA-ATCaaaaaaaTTGTTGGACTTGAACAAGGA---AAAGTTTATGATGAT 400506 ||||| ||| | || | |||||| | |||||| | | ||| ||| ||||| || Sbjct 48346 AAATT-CAGAATATAATTAAAATTATGGGACTTAAGCTTGGAGCTAAA---TATGA-GAA 48292 Query 400507 CTC-AAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTA 400565 | | ||| | | ||||||| |||| ||| | || ||| | ||| |||||||| Sbjct 48291 CACAAAATCTCTTAGATATGGGTCTATTGCTATTATGGCAGATTAGGATCATGATGGGTC 48232 Query 400566 CCATATCAAAGGATTAATCATGAATTTTATCCATTGTTTTTGGCC 400610 ||||| || || ||| | || |||||||| | ||||||||| Sbjct 48231 ACATATAAAGGGTTTATTTATTAATTTTATATAGAATTTTTGGCC 48187 >seq1151 Length=23207 Score = 118 bits (130), Expect = 8e-21 Identities = 301/446 (67%), Gaps = 24/446 (5%) Strand=Plus/Minus Query 400025 TTTTTGTTGATGCAACTATTGTCAATCCTGATTTTGATACTCAAACTAAAGAGTATTTGA 400084 ||||||| ||||| |||||| ||||| ||| ||| | ||||||| || ||||| Sbjct 11252 TTTTTGTCAATGCACTTATTGTTAATCCGACTTTCGATTCATAAACTAAGGAAACTTTGA 11193 Query 400085 CaaaaaaaGCAGCAAATTTTGGTTCCAAATTCGAAGTAACTGAAAAATTTATTAAGG-GA 400143 | | || || | | ||||| || ||| ||| | | ||||||||||| || | || Sbjct 11192 CCACTAAGGCTTCTTAATTTGGATCTAAACCTGAAATTTCAGAAAAATTTATCAAAGCGA 11133 Query 400144 GTCATTAAGACAGGAGTATGTGATCAGATTATTGCTAATGCAAAAGCCAGAGAAGAAGCA 400203 || |||| ||||| || ||| ||||| || | || || || || ||| | || Sbjct 11132 TTC-TTAAAACAGGGATAGTTGAATAGATTGTTAACTAGGCGAAGGCAAGGGAAAATTCA 11074 Query 400204 AA-CTTAAGCAAGACTGATGGAAAAGGTCGAGGTCCAGTAAGA--TACGAA-------AA 400253 || ||| | || || || |||||| || || ||| |||| || Sbjct 11073 AAACTTTAAAAA-AC--ATT-AAAAGGAGGAAAAAAAGCTAGAATTACGGGTATTCCTAA 11018 Query 400254 ATTATATAATGCTCACAAAGCAGGAACCAA-AGAAGGATATAAATGTACCCTAATTTTGA 400312 |||| | ||||| | | |||||||| ||||| | || ||||| ||||||| | Sbjct 11017 ATTAGACGATGCTAATGATGCAGGAACGGCTAGAAGTGAA-AATTGTACATTAATTTTAA 10959 Query 400313 CAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGATT 400372 | || ||||||||||||||| |||| |||||| |||| || | ||| | ||||||||| Sbjct 10958 CGGAAGGAGATTCAGCTAAAGCATTAGCTATGGCTGGAATTGAAGTTGTAGGAAGAGATA 10899 Query 400373 ATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaa 400432 | | ||| || || ||| | || |||||| | | ||||||||||| || || |||| Sbjct 10898 ACTTTGGGGTATTTCCATTGAGGGGAAAATTACTTAATGTTAGGGAAGC---ACCGAAAA 10842 Query 400433 ---aaaTTGCCGATAATGAGGAAATT 400455 |||| |||||| |||||||| Sbjct 10841 AATAAATCATGGATAATTAGGAAATT 10816 Score = 111 bits (122), Expect = 1e-18 Identities = 131/176 (74%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 399295 ATTTCTGTTTGGAATAATGGTGATGGTATTGATGTAGCAATTCATAAAGAACATAATATA 399354 ||||| |||||||||||||| | ||||| |||| ||| ||||||||||||||| || Sbjct 11984 ATTTCAGTTTGGAATAATGGACAAGGTATCCCAGTAGTAATGCATAAAGAACATAATGTA 11925 Query 399355 TGGGTACCATCAATGATTTTTGGAGAACTTTTAACGTCTACTAATTACGATAAAAACGAG 399414 | |||||| ||||||||| || |||||||||| | ||||| ||| | || || Sbjct 11924 TATGTACCAGAAATGATTTTCGGGTAACTTTTAACAGGGTCAAATTATGATGATAATGA- 11866 Query 399415 GAAAAAACTGTTGGTGGTAAAAATGGTTTTGGCGCTAAGCTTGCTAATATTTATTC 399470 |||| ||| || |||| ||||||| ||| ||||| | ||||||| | ||| Sbjct 11865 ATAAAAGTTGTAGGCGGTAGGAATGGTTATGGGGCTAAATTAACTAATATATTTTC 11810 >seq1048 Length=177252 Score = 105 bits (116), Expect = 5e-17 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 637117 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 637176 ||||| | || || | ||| ||||| ||||| ||||||||||||||| | || || ||| Sbjct 72659 AAAATCCTCGTAGACTTTTCATCTCCTAATATAGCTAAAGAAATGCATGTAGGTCACTTA 72718 Query 637177 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 637236 | || || || || ||||| ||| | || | | || ||| | | || | || ||| Sbjct 72719 CGTTCTACAATAATAGGTGAGTCTTTATGCCGTATTTTCGAATTTTAAGGGAATGAAGTT 72778 Query 637237 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATT 637287 | ||||| || ||||| || |||||||| ||| ||||||| ||||||||| Sbjct 72779 TTCCGTATAAACCATGTAGGAGATTGGGGCACTTAATTCGGGATGTTAATT 72829 >seq861 Length=133231 Score = 87.8 bits (96), Expect = 1e-11 Identities = 203/302 (67%), Gaps = 8/302 (3%) Strand=Plus/Plus Query 607494 TTTG-TTACATCAGCTCTTCCTTATCCCAACAATTCATCACCACATTTAGGTAATCTTGT 607552 |||| |||| || || ||||||||| || ||| | || ||||| || | | | | Sbjct 10770 TTTGATTACTTCTGCACTTCCTTATGTAAATAATGCT---CCTCATTTGGGAACTATAAT 10826 Query 607553 TGGTGCTTTATTAAGTGGTGATGTTTATGCTCGAT--TTAAGCGTAATCAAGGTCATGAA 607610 || | | |||||||||||||||| ||| ||| | || ||| |||| | | Sbjct 10827 CGGCTGTGTTTTAAGTGGTGATGTTTTTGCCAGATACTGTAGATTAAG--AGGTTACAAT 10884 Query 607611 GTAATCTATTTGTGTGGTACTGATGAATATGGAACTACAACAATGATTAGAGCTCGTAAG 607670 |||||| | || || |||||||||||||||||| | || || | |||| | Sbjct 10885 ACTATCTATATCTGCGGAACTGATGAATATGGAACTGCTACTGAAATGAAAGCTTTATAA 10944 Query 607671 GAAGGTGTAACTTGTCGTGAACTTTGTGATAAGTATTTTGAGTTACACAAAAAAGTTTAT 607730 ||||| ||||| || || |||||||||| |||||| | | | | | | |||||| Sbjct 10945 GAAGGATTAACTCCTCAGTAAATTTGTGATAAATATTTTAAAATTTAAAGAGACGTTTAT 11004 Query 607731 GATTGGTTTAATATTGAATTTGATGTTTTTGGTAGAACATCTACAACAAAACAGACTGAA 607790 | ||||| | | || || ||| | || ||||||||| | || |||||| ||| || Sbjct 11005 TAATGGTTCGAATTAGATTTCGATATATTCGGTAGAACAACAACCGAAAAACACACTAAA 11064 Query 607791 AT 607792 || Sbjct 11065 AT 11066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740531373823842