Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq29 93.3 8e-14 >seq29 Length=52844 Score = 93.3 bits (102), Expect = 8e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 142964 TACAGATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCTTGCATATAGA 143023 ||||||| || |||||||| |||||| || | || || || || |||||||| Sbjct 37057 TACAGATGAAAATGAGTGGGGATAATGGAAATAACGAGGAGACCCTGTTTTACATATAGA 37116 Query 143024 ACTTAGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATACGTTAGCAAA 143083 | || | |||||| || ||||| ||||| | || ||| | || ||||| |||||||| Sbjct 37117 TTTAAGAAAATGGGCTCATATTTTTGTTATAACCCCTTTATCAGCTAATACTTTAGCAAA 37176 Query 143084 AATAGCCAACGGTATATGCGATAATTTACTA 143114 |||| | || || ||||| ||||||||| || Sbjct 37177 AATAACAAATGGAATATGTGATAATTTATTA 37207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903388422745120