Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1314 120 3e-22 seq892 96.9 4e-15 >seq1314 Length=139336 Score = 120 bits (132), Expect = 3e-22 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| | || ||| || | || || ||||||||||||| ||| ||||| || | Sbjct 38379 CCTCCTCTTAATCTCAAAACCAAATGGAGAGTGGATTCCTTTTAAATATTGTAATCAGAA 38438 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| || | | ||| || || ||||| | | | | ||| || || Sbjct 38439 AGAGTTCTGCCGTCTTCTAATTATTTACCAGCGAAAATAAGTCTTTATTAATCTGGTGGA 38498 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||| ||||||| || || || | || || || | ||| || Sbjct 38499 ATTCCTTCCTTGTCTTAAATTTTTGCCTTTACATTTTCAATTGAATCAGAAGCTTCAACA 38558 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725 || | |||||||||||| || |||||||||||||||||||||| |||||| |||||||| Sbjct 38559 TCTAAAGTAATGGTTTTTCCTGTTAAAGTTTTAACGAAAATTTACATTTTCTTTTTGTT 38617 >seq892 Length=79579 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | || || || ||||| |||| ||| |||||||| | Sbjct 47353 CCACCTCTTAATCTCAAGACTAAATGGAGGGTTGATTCTTTTTAAATATTGTAGTCAGAA 47412 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| || | | ||| ||||| || || | | | | ||| || || Sbjct 47413 AGAGTTCTTCCGTCTTCTAATTATTTTCCTGCGAAGATAAGTCTTTATTAATCTGGGGGA 47472 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCAC 134665 || |||||||| |||| ||||| |||||| | | |||| | |||||| | ||| || Sbjct 47473 ATACCTTCTTTGTCTTAGATTTTAGCTTTGAC-GTTTTCAATAGAGTCGGAAGCTTCAAC 47531 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725 || | ||| || ||||| |||||||| ||||||||||| |||| |||| | | ||| || Sbjct 47532 ATCTAAAGTGATTGTTTTTCCGGTTAATGTTTTAACGAAGATTTACATTATTTATTTATT 47591 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | || || || ||||| |||| ||| |||||||| | Sbjct 47125 CCACCTCTTAATCTCAAGACTAAATGGAGGGTTGATTCTTTTTAAATATTGTAGTCAGAA 47184 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| || | | ||| ||||| || || | | | | ||| || || Sbjct 47185 AGAGTTCTTCCGTCTTCTAATTATTTTCCTGCGAAGATAAGTCTTTATTAATCTGGGGGA 47244 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCAC 134665 || |||||||| |||| ||||| |||||| | | |||| | |||||| | ||| || Sbjct 47245 ATACCTTCTTTATCTTAGATTTTAGCTTTGAC-GTTTTCAATAGAGTCGGAAGCTTCAAC 47303 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || ||||| |||||||| ||||||||||| |||| ||| Sbjct 47304 ATCTAAAGTGATTGTTTTTCCGGTTAATGTTTTAACGAAGATTTACAT 47351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505385657642840