Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq767 138 5e-28 >seq767 Length=84717 Score = 138 bits (152), Expect = 5e-28 Identities = 307/460 (67%), Gaps = 3/460 (1%) Strand=Plus/Plus Query 64927 CATCGGAATAATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATA 64986 ||| |||||||| || |||| | | || ||||| | |||||||| || ||||| Sbjct 47361 CATTGGAATAATAGGCAAATAATACTTCGGTTCAACCAAATATCCATCATCTTCTAAATA 47420 Query 64987 CTTCAAAATGGCATCATCCTCTTTTGGAAATATAGAACGAGTTATTTTATTCAATTGAGT 65046 || | ||| |||||| | || ||||| || | ||| |||||||| || | ||| Sbjct 47421 CTAAAGAATATAATCATCATTTTAAGGAAAAATGACTCTAGTAATTTTATTTAAATTAGT 47480 Query 65047 ATAAATATATCTTTCGGATGCGTGGTCTTGTCCAG---TTCGTCGTGTTCCAAACTGACC 65103 || || |||||| | || || |||| || | || | ||||||| ||| Sbjct 47481 ATGTATGTATCTTGCTGAAGCAGCTTCTTTACCCCCCATATTTCTAGAACCAAACTAACC 47540 Query 65104 ATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAAT 65163 | ||||| | | ||||||||| || || || | ||||||| |||||||| |||| Sbjct 47541 TATAGGCATAAGAAGATTAATATTATTCGACCCTACGAAATTCTATGCCATTCCCGTAAT 47600 Query 65164 TGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACT 65223 | | | | | | ||| ||||||||||| |||| ||||| | |||||||| Sbjct 47601 AGTTTAAGCCAGAGACTATTCTCCGTGATGATAAGCTGAGTGTTCTGCCACATATCCCGA 47660 Query 65224 AAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAATACAATATTTT 65283 || || ||||||||| ||||| | | | ||| ||||||| || | ||| ||||| Sbjct 47661 AAGTTAAGCAACTTTAATTTCTTATTTAAGATTTCTTTTAAAGCAAGCAAACAGAATTTT 47720 Query 65284 CCGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTT 65343 | | | | | ||||||||||||| || ||||||||| ||| || ||| | | Sbjct 47721 TCTTTACCCAGTTTTCAATCCATCACATATATTAGGAATAGATCTTGCATTATCTGAAAT 47780 Query 65344 TGAGAAATGTATGAATTCTTTGTTAATAAATTCTTCATAT 65383 ||||||| || || || || | | ||| |||| |||| Sbjct 47781 AGAGAAATTAATTAACTCCTTATGTACAAAATCTTTATAT 47820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235674206470050