Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq1181 100 2e-16 >seq1181 Length=100449 Score = 100 bits (110), Expect = 2e-16 Identities = 169/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||| || || | || | ||| |||||||||| |||||||||||| | Sbjct 74907 CCTCCTCTTAATCTCAAAACTAAATGGAGAGTGGATTCTTTTTAAATATTGTAATCTGAA 74966 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| || ||||||||||| ||| || ||| ||||||| |||| || ||| || Sbjct 74967 AGAGTTCTGCCATCTTCCAATTATTTTCCGGCAAATATAAGTCTTTATTAATCTGGAGGA 75026 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||||||||| |||||| ||| |||| | | | || | | | Sbjct 75027 ATTCCTTCTTTGTCTTAAATTTTGGCTTTAACATTTTCAATTGAATCGGATGCCTCAACA 75086 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATTACAATATAT 101251 || | || || ||||| || || |||||||| | ||||||| |||| || | || | Sbjct 75087 TCTAAAGTGATTGTTTTACCTGTTAATGTTTTGACGAAAATTTACATTTTTTTTAAATTT 75146 Query 101252 TTTTT 101256 ||||| Sbjct 75147 TTTTT 75151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409650729641403