Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1314 86.0 1e-11 >seq1314 Length=139336 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| ||||| || || |||| || |||||||| | | |||||| || ||||||| Sbjct 38402 ATGGAGAGTGGATTCCTTTTAAATATTGTAATCAGAAAGAGTTCTGCCGTCTTCTAATTA 38461 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || ||||| ||||| || | | || | | ||||||||||| |||| |||||| Sbjct 38462 TTTACCAGCGAAAATAAGTCTTTATTAATCTGGTGGAATTCCTTCCTTGTCTTAAATTTT 38521 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | || ||| | || | || ||| || || || | |||||| ||||| || || Sbjct 38522 TGCCTTTACATTTTCAATTGAATCAGAAGCTTCAACATCTAAAGTAATGGTTTTTCCTGT 38581 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||| || ||||| | | |||||| Sbjct 38582 TAAAGTTTTAACGAAAATTTACATTTT 38608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153790982025407