Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ichthyophthirius_20multifiliis_20[genbank_20GCA_5F000220395.1_202011 -07-18] 2,017 sequences; 48,799,969 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1353 269 3e-67 >seq1353 Length=60684 Score = 269 bits (298), Expect = 3e-67 Identities = 511/742 (69%), Gaps = 19/742 (3%) Strand=Plus/Minus Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442 || || || |||| || || || | || ||| | | ||| ||||||||| |||| Sbjct 30256 TTCATCCCAATTAATTCAACAGGTAAAGCTTCAGAAATAAATTCTTTTTCAATTTCAACA 30197 Query 23443 GCATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGAT-ATTTTAAATACTTAAA 23501 || || || || |||| |||||||||| ||| | | |||||| || || | Sbjct 30196 GCTTCAGCGATAAT---AACATTAACTTCTTCTTTAGCTAATTTATTTTACATCATTGAG 30140 Query 23502 CAAT--AAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 || ||||| |||||||| ||||| ||||| || || || |||||||| ||| Sbjct 30139 TAAAGCAAACAAGCAAAATCTGTATGTAATCCTTCGTCTCTTGATATTAATTCATTTGAA 30080 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCA-AATGATCC 23618 || ||||| || |||||||| || |||||||| |||||| || || ||| || ||| Sbjct 30079 AAAGTTAAACCAGGCATTAAAGATCTTTTTTTAAGCCAAAAAATGGC-GCAGAAACTTCC 30021 Query 23619 GGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATT 23678 ||||| || || |||| ||| ||||| || || | || | | | || | |||| Sbjct 30020 ACTGAAGAAGATTCCTTCAATAGCTGCAAATGCAACTAATCGAGAAGCGAAATTGTCATT 29961 Query 23679 ATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTAC-ACACTCAATTGTTT 23737 || || | ||||||||| | ||| | ||| || |||| ||| ||| || Sbjct 29960 ATTATTA---ATCCATTTTAAAGCCCATTAAGCTTTTTTATTTATTACAGG-AATATTTA 29905 Query 23738 CAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797 | ||||| || ||||| |||||| | || |||| ||||||| ||||| |||| || Sbjct 29904 GACAAGCTTTAAAAAGAAACTCTTTTTCATTATCATCTTTTATATAAGTATCTATTAATA 29845 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 || ||| |||| |||||||||||||| ||||| || | ||| ||||| ||| ||| | Sbjct 29844 AAGAATAAGTTTCGGAATGAATATTTTCCATAGCTATTTAAAATCCATAGAAAGCTCTTG 29785 Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917 |||| | | || ||| ||| | |||| || |||||||||||| |||||| |||| Sbjct 29784 CTTCTGGAATTTAAACTTCACACATAAATTATTCAGCTAAATTTTCTAGAACAATTCCAT 29725 Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTT---CATCAGTTGATA 23974 | ||| ||||| || ||||||||||| || ||||| ||||| | ||||||| | Sbjct 29724 CTGAAGCTGCAAAAAATGCAAGAACATACTTAATAAAGTGTCTCTCGCCATCAGT---CA 29668 Query 23975 ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTG 24034 || ||| |||||| || | ||||| | | ||||| ||| || |||||||||| | Sbjct 29667 ATCTTTCCCAATCTTTCAAATCTTAATAAAGATCAATTTCGTCTGCTGTCCAAAATGAAG 29608 Query 24035 CCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATC 24094 | | | || |||||| ||| || | ||||| || |||||| || || || |||| Sbjct 29607 CGAGTTCTTTTTTGTACATTTCCCATATTTTATTATATTTTATTGGGAACATAACAAATC 29548 Query 24095 TATCAGATGATTCTTTAAGAAT 24116 | | | ||||| |||||| Sbjct 29547 TGTTTGGATTTTCTTAAAGAAT 29526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521474851983800