Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq605 107 4e-18 seq14934 95.1 3e-14 seq6687 95.1 3e-14 >seq605 Length=992 Score = 107 bits (118), Expect = 4e-18 Identities = 70/76 (92%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 165706 GCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTC 165765 ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 188 GCTAGCCCGTCTAGCTCAGT-GGTAGAGCGCCAGACTTTTAATCTGGTGGTCGAGGGTTC 130 Query 165766 GAGCCCCACGATGGGC 165781 || |||| || ||||| Sbjct 129 GATCCCCTCGGTGGGC 114 >seq14934 Length=1730 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| | || |||| | |||||||||||||||||| Sbjct 1551 GCCCGTCTAGCTCAGTCGGTAGAGCGCTTGGCTCTTAACCAAGTGGTCGTGGGTTCGAGC 1492 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1491 CCCACGGTGGGC 1480 >seq6687 Length=2509 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| | || |||| | |||||||||||||||||| Sbjct 166 GCCCGTCTAGCTCAGTCGGTAGAGCGCTTGGCTCTTAACCAAGTGGTCGTGGGTTCGAGC 225 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 226 CCCACGGTGGGC 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057534188289290