Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq6006 122 7e-23 seq16706 98.7 8e-16 >seq6006 Length=2920 Score = 122 bits (134), Expect = 7e-23 Identities = 177/249 (71%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 25014 TTTATAAGTAA-TAGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCAT 25072 ||||| | ||| ||| ||||||| | |||||| |||| || |||||||| || || || Sbjct 2837 TTTATTATTAAATAGAAGAAAAATGTAGATATTCGTCAAGACTTTGACGGGTAAGACTAT 2778 Query 25073 TACCGCCGAAACGGAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAA 25132 ||| ||| || ||| | || || | | | | ||| || ||| || || Sbjct 2777 TACTCTCGATGTCGAGCCCTCTGATACCATCGAAAACGTTAAGGCCAAGATTCAAGACAA 2718 Query 25133 AGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTC 25192 ||||||| | ||| |||||||||||||| |||||||| || || | |||||||| Sbjct 2717 AGAAGGTATCCCCCCCGATCAACAAAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGG 2658 Query 25193 CAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATT 25252 | ||| || | |||||||| || ||||| ||||| ||||||||| |||| ||| || | Sbjct 2657 AAGAACCTTGTCTGATTACAACATCCAAAAAGAATCAACTCTTCACTTGGTCTTAAGACT 2598 Query 25253 ACGAGGAGG 25261 ||||||| Sbjct 2597 TAGAGGAGG 2589 >seq16706 Length=515 Score = 98.7 bits (108), Expect = 8e-16 Identities = 112/149 (75%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 25113 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 25172 ||||||| | || || || |||||| | || ||||||||||||||||||||||| Sbjct 312 AAGCAAAGA-TTCAGGACAAGGAAGGTATCCCACCCGATCAACAAAGACTTATCTTTGCT 254 Query 25173 GGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACT 25232 || |||||| | |||||| | |||| | | || ||||| ||||| ||||| ||||| Sbjct 253 GGTAAACAACTTGAAGATGGAAGAACTCTTTCAGACTACAACATTCAGAAGGAGTCTACC 194 Query 25233 CTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||| |||| || || | ||||||| Sbjct 193 CTTCACTTGGTCTTGAGACTCAGAGGAGG 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410689744171562