Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq7827 105 5e-18 >seq7827 Length=2313 Score = 105 bits (116), Expect = 5e-18 Identities = 272/408 (67%), Gaps = 15/408 (4%) Strand=Plus/Plus Query 97119 GACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAG 97178 ||| || || | ||||||||| | |||||||| |||||||||||||| || || ||||| Sbjct 841 GACTTGAGCAAGCATACAAGTAAGGAGAGAATAACTAGCAATGTTAAAGGGTACACCTAG 900 Query 97179 TCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTT---CCATCACACACATA 97235 ||||| || ||| |||||||| | || || || |||||| || ||| |||||| Sbjct 901 ACCCATGTCGCATGACCTTTGATACATTTGGCATGATAGCTTTTGATCAGCACTCACATA 960 Query 97236 AAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCA 97295 || | ||| | ||| || || || | |||||||| | | || | ||||| Sbjct 961 GAATTAGGCCAAAATATGGCAAGGTGGAAGGGCCATTTTGTTTAAAGCTGCGGGGTTCCA 1020 Query 97296 AGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA--TCTGC 97353 ||||| ||| | ||||| || ||| || || | | ||| ||| || | || || Sbjct 1021 AGCACTCATAACAATTCTCCTGCTGGTAGGATTATTTTTTATTTGATTTATAACGTCAGC 1080 Query 97354 TTTAATTGATC-AACGCCT--TCTCCACCATAATTGTGCTTAAGACCTTGA-TATTCTGC 97409 | ||||| || ||| | | || ||| | | || || || || Sbjct 1081 --AAGCTGATCGAATCCCTAGTTGGTGTAGTCATCATGCAT----GGTAGAGTAATCAGC 1134 Query 97410 TCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACA 97469 |||||||| ||||||||||| ||||| ||||| || | ||| | ||||||||| || Sbjct 1135 CCCAAAATGTCTCCATTGGAAGCCATAGACAGGGCCTAAGTCCCATTCTTCTCTTTCTTT 1194 Query 97470 GAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 || ||||| |||| | | | || || ||||| |||||||||| Sbjct 1195 GAGACCAATACTATCAAGAAACTGTCTTGAAGCATTTCCATCCCAAAT 1242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346693626247310