Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq7827 109 4e-19 >seq7827 Length=2313 Score = 109 bits (120), Expect = 4e-19 Identities = 392/609 (64%), Gaps = 7/609 (1%) Strand=Plus/Minus Query 20068 GTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCT 20127 || || |||| ||| |||| || ||||| | ||||| ||||||||| || ||| || Sbjct 1329 GTCTTCTGGAGAGGAGTTGCCGAGGAGTTGATTTGGTTCATTAAAGGAGACACCAATGCT 1270 Query 20128 ACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTA 20187 | | ||| || || | |||| |||||| | | ||| || | || ||| | Sbjct 1269 AAACATCTTAGCGATAAGAAAATTAAAATTTGGGATGGAAATGCTTCAAGACAGTTTCTT 1210 Query 20188 CACAGCAATGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAA 20247 | || | ||| | | | | |||| |||| || || ||||| ||||| || ||| Sbjct 1209 GATAGTATTGGTCTCAAAGAAAGAGAAGAATGGGACTTAGGCCCTGTCTATGGCTTCCAA 1150 Query 20248 TGGAGACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTA 20307 |||||||||||||| ||||| || | |||| | | || | ||| | Sbjct 1149 TGGAGACATTTTGGGGCTGATTACTCTACCATGCATGATGACTACACCAACTAGGGATTC 1090 Query 20308 GATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATT 20367 ||||| | | ||||| ||| ||| |||| || || | | ||| |||||| || Sbjct 1089 GATCAGCTTGCTGACGTTATAAATCAAATAAAAAATAATCCTACCAGCAGGAGAATTGTT 1030 Query 20368 TTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTA 20427 | | || |||||| | || | | |||||| | || || || ||||| | Sbjct 1029 ATGAGTGCTTGGAACCCCGCAGCTTTAAACAAAATGGCCCTTCCACCTTGCCATATTTTG 970 Query 20428 TGCCAATTTTACGT---TGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCT 20484 | |||| || || |||| || | | | || || |||||||||||| | || Sbjct 969 GCCTAATTCTATGTGAGTGCTGATCAAAAGCTATCATGCCAAATGTATCAAAGGTCATGC 910 Query 20485 GATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATT 20544 || ||||| || ||||| || || || ||||| |||||| | || ||||| | |||| || Sbjct 909 GACATGGGTCTAGGTGTACCCTTTAACATTGCTAGTTATTCTCTCCTTACTTGTATGCTT 850 Query 20545 GCACATGT-TACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATAT 20603 || || || | | || || || | ||||| || || || | ||||| || ||| | Sbjct 849 GCTCAAGTCTGCGGACTT-AAGAGAGGTGAGTTTGTACATGTTCTTGGAGATGCTCATGT 791 Query 20604 TTACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCC- 20662 |||| |||||| | || || |||||| | | |||| | || | || | | |||| Sbjct 790 TTACAAGAATCATGTTGAGCCATTAAAAGAATAATTAAAAAGATACCCTTATCCCTTCCC 731 Query 20663 -CAACTCTT 20670 |||||||| Sbjct 730 TCAACTCTT 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399079970528935