Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq7827 98.7 1e-15 >seq7827 Length=2313 Score = 98.7 bits (108), Expect = 1e-15 Identities = 192/279 (69%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 70205 AGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCG 70264 ||||| || || ||| | | ||||| || |||| ||| || ||||||| || ||||| Sbjct 1041 AGGAGAATTGTTATGAGTGCTTGGAACCCCGCAGCTTTAAACAAAATGGCCCTTCCACCT 982 Query 70265 TGTCACTGTTTGGCTCAGTTTTACTCGTACGATGG-CAAAT--TGTCATGCTTAATGTAT 70321 || || |||||| | || || | | || |||| | |||||| ||||||| Sbjct 981 TGCCATATTTTGGCCTAATTCTATGTGAGTGCTGATCAAAAGCTATCATGCCAAATGTAT 922 Query 70322 CAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTG 70381 || ||| ||||||||| || |||||||||||||||||||| || |||||| | | Sbjct 921 CAAAGGTCATGCGACATGGGTCTAGGTGTACCCTTTAACATTGCTAGTTATTCTCTCCTT 862 Query 70382 ACGCACATGATTGCTCACATTACCGGCCTGAA-AGCGCACGAGTTCGTACACACCATTGG 70440 || ||| ||||||| | ||| || || || | ||||| ||||| |||| Sbjct 861 ACTTGTATGCTTGCTCAAGTCTGCGGACTTAAGAGAG-GTGAGTTTGTACATGTTCTTGG 803 Query 70441 CGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAA 70479 || ||||| || || ||||| | ||||||||||| Sbjct 802 AGATGCTCATGTTTACAAGAATCATGTTGAGCCATTAAA 764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740861124139080