Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq19055 123 2e-23 seq6006 105 5e-18 >seq19055 Length=771 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| ||||| | ||||| || ||||| || || || || ||||||||||| || Sbjct 196 CCGCCTCTTAATCTAAGGACTAAGTGGAGGGTTGATTCCTTCTGAATGTTGTAATCACTG 255 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| |||| ||||||| ||| |||||| | ||||| | ||||| ||| || Sbjct 256 AGTGTTCTACCGTCCTCTAATTATTTACCAGCGAAGATCAATCTCTGTTGATCGGGAGGG 315 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||| ||||| |||| ||| || || | || || || || ||| || Sbjct 316 ATTCCTTCCTTGTCCTAAATCTTGGCTTTGACGTTCTCGATAGTGTCAGATGGTTCAACG 375 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | || ||||| ||||| || || || |||||||| || |||||| Sbjct 376 TCGAGAGTGATGGTCTTACCGGTGAGGGTCTTTACAAAGATCTGCATA 423 >seq6006 Length=2920 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| | |||||| || || ||||| || || |||||||| ||||||||||| Sbjct 2589 CCTCCTCTAAGTCTTAAGACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAATCAGAC 2648 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||| || | || ||||| | || | | |||||| ||| || Sbjct 2649 AAGGTTCTTCCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTTTGTTGATCGGGGGGG 2708 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||| ||| ||| || |||| |||||||| || ||| Sbjct 2709 ATACCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCGATGGTATCAGAGGGCTCGACA 2768 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 || | ||||| || ||||| |||| ||| || || || || | ||| ||| Sbjct 2769 TCGAGAGTAATAGTCTTACCCGTCAAAGTCTTGACGAATATCTACATTTTT 2819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362084814176403