Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1421 127 2e-24 >seq1421 Length=1529 Score = 127 bits (140), Expect = 2e-24 Identities = 387/596 (65%), Gaps = 11/596 (2%) Strand=Plus/Minus Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 ||| || || ||| |||| ||||||||| ||| || | |||||||| || || | Sbjct 1034 ACAAGCGAAGTCAGTGTGCATACCTTCATCTCTAGAGATGAGCTCATTAGAGAAGGTAAG 975 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594 || ||||| | ||| | || || | ||| || ||||| || | || |||||||| Sbjct 974 TCCTGGCATGAGTCCACGTTTCTTGAGCCAGAAAATTGAACAGAAAGAGCCAGAAAAGAA 915 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAA 21654 || |||||||| | ||| || ||||||| | |||| || | ||| | || | |||| Sbjct 914 TATACCCTCAACTGAAGCGAAAGCAACTAGCCTTTCAGCGAAGCTAGCTGTTTCA-CCAA 856 Query 21655 TATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAAT-ACAATCA--ATTGTATCAATAGC 21711 | |||| | |||||||| |||||||| || | |||| || | | | || Sbjct 855 T--CCATCTCAATGCCCATTCTGCCTTTT---TAGTGACAACTGGGATATTTTAGACGGC 801 Query 21712 TTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATA 21771 ||| || | || | |||||| | | || | || || Sbjct 800 TTTGAATAAATATTCTTTTTCTTGAGCGTCACTAATCAAAGTATCAATTAGAAGGGAGTA 741 Query 21772 CATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGA 21831 ||||||| || || ||||| ||| |||| |||||||| |||||||| || |||| Sbjct 740 GGTTTCAGAGTGGATGTTTTCCATCATCATCTAGAATCCGTAGAAACATCTAGCTTCTGG 681 Query 21832 ACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGC 21891 | |||| || | | |||| || || | ||| |||||||| || || ||| || Sbjct 680 AACCTGAATTTCAGTGCAGAATCTTTAGGCTAGGTTCTCATTTACAATACCGTCAGAAGC 621 Query 21892 GGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCA 21951 || ||||| || | | | ||| || || | || ||||| || | | | | | ||| Sbjct 620 AGCGAAAAAGGCGAGAACGTGTTTGATGAAGTGTCTCTCGTTGTCGTTGAGTCTCTCCCA 561 Query 21952 ATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA-GCTAGCAATAGCCT 22010 ||| | |||| | | | ||| | ||| || | |||||| || ||| || || | Sbjct 560 GTCTTTAACATCTGTGGCAAGATCGATTTCCTCTGATGTCCAGAATGCT-GCCATTTAAT 502 Query 22011 TTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGTTA 22066 ||| ||||| ||||||||||||||||| | ||||| || || ||||| |||||| Sbjct 501 CTTTGTACATTTTCCAGATATCATTATATTTGATTGGCAAGATCACAAATCTGTTA 446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531758629564920