Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1421 188 8e-43 >seq1421 Length=1529 Score = 188 bits (208), Expect = 8e-43 Identities = 410/613 (67%), Gaps = 3/613 (0%) Strand=Plus/Minus Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 ||||| || | || || ||||| || || | |||||| |||| || || | |||||| Sbjct 1045 TTGTAAATGAGACAAGCGAAGTCAGTGTGCATACCTTCATCTCTAGAGATGAGCTCATTA 986 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| || | ||||| | ||||| |||||||||||||| || |||||| ||| Sbjct 985 GAGAAGGTAAGTCCTGGCATGAGTCCACGTTTCTTGAGCCAGAAAATTGAACAGAAAGAG 926 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 |||||||| |||||||| || || | || || || || | | ||| || || | || Sbjct 925 CCAGAAAAGAATATACCCTCAACTGAAGCGAAAGCAACTAGCCTTTCAGCGAAGCTAGCT 866 Query 93260 GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319 | | || |||||| | || ||||| || || ||||| | | | || | || Sbjct 865 GTTTCACCA---ATCCATCTCAATGCCCATTCTGCCTTTTTAGTGACAACTGGGATATTT 809 Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 | || || || |||| || ||| || | | || | || | ||||| |||| Sbjct 808 TAGACGGCTTTGAATAAATATTCTTTTTCTTGAGCGTCACTAATCAAAGTATCAATTAGA 749 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 || || || ||||||| |||| || ||||| || | ||||||||||||||||||| Sbjct 748 AGGGAGTAGGTTTCAGAGTGGATGTTTTCCATCATCATCTAGAATCCGTAGAAACATCTA 689 Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499 ||||| | | ||| | ||| | ||||| | | || || ||||| || ||||| Sbjct 688 GCTTCTGGAACCTGAATTTCAGTGCAGAATCTTTAGGCTAGGTTCTCATTTACAATACCG 629 Query 93500 TCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC 93559 || || || || ||||| || | | || || || || ||| |||| | || || || Sbjct 628 TCAGAAGCAGCGAAAAAGGCGAGAACGTGTTTGATGAAGTGTCTCTCGTTGTCGTTGAGT 569 Query 93560 TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619 | ||||| || | |||| | | |||||||| ||| || ||||| || | ||| Sbjct 568 CTCTCCCAGTCTTTAACATCTGTGGCAAGATCGATTTCCTCTGATGTCCAGAATGCTGCC 509 Query 93620 TCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGA 93679 | | ||||||||| | ||| || || | ||||| ||||| || || ||||| | Sbjct 508 ATTTAATCTTTGTACATTTTCCAGATATCATTATATTTGATTGGCAAGATCACAAATCTG 449 Query 93680 TTAGGGTTATCTT 93692 |||||||| |||| Sbjct 448 TTAGGGTTCTCTT 436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556711958068920