Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq14934 96.9 7e-15 seq6687 96.9 7e-15 >seq14934 Length=1730 Score = 96.9 bits (106), Expect = 7e-15 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142498 GAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGT 142557 |||| |||||| ||||||||||||||||||||| | ||||||| | ||||||||||||| Sbjct 1557 GAGAAAGCCCGTCTAGCTCAGTCGGTAGAGCGCTTGGCTCTTAACCAAGTGGTCGTGGGT 1498 Query 142558 TCGAGCCCCAC 142568 ||||||||||| Sbjct 1497 TCGAGCCCCAC 1487 >seq6687 Length=2509 Score = 96.9 bits (106), Expect = 7e-15 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142498 GAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGT 142557 |||| |||||| ||||||||||||||||||||| | ||||||| | ||||||||||||| Sbjct 160 GAGAAAGCCCGTCTAGCTCAGTCGGTAGAGCGCTTGGCTCTTAACCAAGTGGTCGTGGGT 219 Query 142558 TCGAGCCCCAC 142568 ||||||||||| Sbjct 220 TCGAGCCCCAC 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027555203873103