Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq7827 140 3e-28 >seq7827 Length=2313 Score = 140 bits (154), Expect = 3e-28 Identities = 284/417 (68%), Gaps = 11/417 (3%) Strand=Plus/Plus Query 20170 TAGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCA--ACGTGTGAATAAACTCC 20227 || |||||| | ||| | ||||| | || |||||||| | || ||| | |||||| Sbjct 766 TAATGGCTCAACATGATTCTTGTAAACATGAGCATCTCCAAGAACATGT--ACAAACTCA 823 Query 20228 CCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATG 20287 || |||| || || |||||||||||| |||| | ||| ||||| || |||||| Sbjct 824 CCTCTCTTAAGTCCGCAGACTTGAGCAAGCATACAAGTAAGGAGAGAATAACTAGCAATG 883 Query 20288 TTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCA 20347 ||||| || || || | ||||||||| | ||||| ||||||| || || || |||| Sbjct 884 TTAAAGGGTACACCTAGACCCATGTCGCATGACCTTTGATACATTTGGCATGATAGCTTT 943 Query 20348 CCGTCAGC---TACATAAAATT--GACATAACAAGTGACAGGGCGGAAGCGCCATCAACG 20402 ||||| ||||| |||| | || || | || || || ||||| ||||| Sbjct 944 TGATCAGCACTCACATAGAATTAGGCCAAAATA--TGGCAAGGTGGAAGGGCCATTTTGT 1001 Query 20403 ACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTA 20462 || | || |||||||| |||| ||||| ||||| || | ||||||||||||| Sbjct 1002 TTAAAGCTGCGGGGTTCCAAGCACTCATAACAATTCTCCTGCTGGTAGGATTATTTTTTA 1061 Query 20463 TTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGT 20522 || || | || || | | || || || |||| | || |||||| ||| | | Sbjct 1062 TTTGATTTATAACGTCAGCAAGCTGATCGAATCCCTAGTTGGTGTAGTCATCATGCATGG 1121 Query 20523 CCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCC 20579 ||| | |||||||| || ||||| ||||| || || ||||| || || |||| Sbjct 1122 TAGAGTAATCAGCCCCAAAATGTCTCCATTGGAAGCCATAGACAGGGCCTAAGTCCC 1178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441254826567720