Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq19055 87.8 2e-12 seq16706 86.0 7e-12 >seq19055 Length=771 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| ||||||||| || || | |||| |||| | ||||||||||| Sbjct 232 TCCTTCTGAATGTTGTAATCACTGAGTGTTCTACCGTCCTCTAATTATTTACCAGCGAAG 291 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | || ||| || |||| || | | ||||||||| || || ||||| || Sbjct 292 ATCAATCTCTGTTGATCGGGAGGGATTCCTTCCTTGTCCTAAATCTTGGCTTTGACGTTC 351 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| | ||| || |||| |||||||| || || || || ||||||||| Sbjct 352 TCGATAGTGTCAGATGGTTCAACGTCGAGAGTGATGGTCTTACCGGTGAGGGTCTTTACA 411 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 412 AAGATCTGCAT 422 >seq16706 Length=515 Score = 86.0 bits (94), Expect = 7e-12 Identities = 162/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 41974 TTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 42033 || ||| |||||||| | | ||| ||||| || | || |||||| ||||| |||| Sbjct 157 TTAATCAGCCTCCTCTGAGTCTCAAGACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGT 216 Query 42034 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 42093 | || | ||||| | | || || || || |||||||| || || |||| || || | Sbjct 217 AGTCTGAAAGAGTTCTTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGTCTTTGTTGAT 276 Query 42094 CGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTC 42152 ||| ||| | | ||||||||| ||| | |||| ||||| | | | ||||| Sbjct 277 CGGGTGGGATACCTTCCTTGTCC-TGAATCTTTGCTTTGACGTTTTCAATTGTGTCAGAT 335 Query 42153 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || || | || ||||| || || || || ||||| || ||||||||||| Sbjct 336 GGCTCAACGTCAAGAGTAATGGTCTTTCCAGTAAGAGTCTTGACGAAGATTTGCAT 391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543067606008720