Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6006 105 7e-18 seq19055 104 2e-17 >seq6006 Length=2920 Score = 105 bits (116), Expect = 7e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||||||||| ||||||||||| | | ||| | ||||||| | || | Sbjct 2613 TGAAGAGTTGATTCTTTTTGGATGTTGTAATCAGACAAGGTTCTTCCGTCTTCCAACTAC 2672 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| | ||||| | || || ||||| || || |||||||| ||||| || || Sbjct 2673 TTTCCAGCAAAGATGAGTCTTTGTTGATCGGGGGGGATACCTTCTTTGTCTTGAATCTTG 2732 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | |||||| || || || || | ||| | ||||| || ||| Sbjct 2733 GCCTTAACGTTTTCGATGGTATCAGAGGGCTCGACATCGAGAGTAATAGTCTTACCCGTC 2792 Query 64421 AAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| || ||||| || | |||||| Sbjct 2793 AAAGTCTTGACGAATATCTACATTTT 2818 >seq19055 Length=771 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||||||||| || |||| | ||| | |||| ||||| ||||| ||| Sbjct 454 GTGGATTCTTTTTGAATGTTATAGTCTGATAAGGTTCTTCCGTCCTCAAGTTGCTTACCG 513 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| || | ||| || ||||||||||| ||||| || ||||| || || ||| Sbjct 514 GCGAAAATAAGTCTCTGTTGATCGGGAGGAATACCTTCCTTATCTTGGATCTTAGCCTTG 573 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | ||| | ||| |||||||| || || Sbjct 574 ACATTTTCAATGGTGTCTGATGGTTCGACGTCAAGAGTGATGGTTTTGCCGGTTAAGGTC 633 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || | ||| Sbjct 634 TTAACGAAGATCTACAT 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499511251190520