Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq19055 102 7e-17 >seq19055 Length=771 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 |||| || || ||||||||||| || || || ||||| |||| ||| || || || Sbjct 214 ACTAAGTGGAGGGTTGATTCCTTCTGAATGTTGTAATCACTGAGTGTTCTACCGTCCTCT 273 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 |||| ||| || ||| | ||||||| || || || || || || ||||| || || | | Sbjct 274 AATTATTTACCAGCGAAGATCAATCTCTGTTGATCGGGAGGGATTCCTTCCTTGTCCTAA 333 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || ||||| || | || | ||||| || | || || |||||||| | || || Sbjct 334 ATCTTGGCTTTGA-CGTTCTCGATAGTGTCAGATGGTTCAACGTCGAGAGTGATGGTCTT 392 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || |||||||| || ||||| Sbjct 393 ACCGGTGAGGGTCTTTACAAAGATCTGCAT 422 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | ||| || || || | || || || ||||| ||||| || ||||| || Sbjct 421 ATACCTCCTCTGAGTCTTAAGACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCT 480 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | |||| | || || | ||| || || ||| | || | || || || || || Sbjct 481 GATAAGGTTCTTCCGTCCTCAAGTTGCTTACCGGCGAAAATAAGTCTCTGTTGATCGGGA 540 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| |||||||| || || |||| ||| | |||||| || | ||| Sbjct 541 GGAATACCTTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCTGATGGTTCG 600 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | ||||||||||||| || || || || || | ||| Sbjct 601 ACGTCAAGAGTGATGGTTTTGCCGGTTAAGGTCTTAACGAAGATCTACAT 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451882385194680