Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6006 125 2e-23 seq16706 104 6e-17 >seq6006 Length=2920 Score = 125 bits (138), Expect = 2e-23 Identities = 165/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || |||||| | ||| | ||| ||||| || || ||||||| |||||| |||| ||| || Sbjct 2594 TCTAAGTCTTAAGACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAATCAGACAAGGT 2653 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 ||||| ||||||| || |||||| || |||||||| | || || || || || || Sbjct 2654 TCTTCCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTTTGTTGATCGGGGGGGATACC 2713 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || |||||||| ||| ||| ||||| ||| || | | || ||||| | Sbjct 2714 TTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCGATGGTATCAGAGGGCTCGACATCGAG 2773 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || ||||||||||| | ||| || || || || |||||||| Sbjct 2774 AGTAATAGTCTTACCCGTCAAAGTCTTGACGAATAT---CTACATTTT 2818 >seq16706 Length=515 Score = 104 bits (114), Expect = 6e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| ||| | ||| || || |||||||| || | ||||||||| | | ||| ||| Sbjct 174 AGTCTCAAGACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCTGAAAGAGTTCTT 233 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| || || || || || ||||| || | || || || || || ||||| Sbjct 234 CCATCTTCAAGTTGTTTACCAGCAAAGATAAGTCTTTGTTGATCGGGTGGGATACCTTCC 293 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||||||| || ||| ||| | ||||| | || || || || | || Sbjct 294 TTGTCCTGAATCTTTGCTTTGACGTTTTCAATTGTGTCAGATGGCTCAACGTCAAGAGTA 353 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || ||||| || || || ||||| Sbjct 354 ATGGTCTTTCCAGTAAGAGTCTTGACGAAGATTTG 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178598611217661