Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1421 132 5e-26 seq6006 95.1 1e-14 seq19055 84.2 2e-11 >seq1421 Length=1529 Score = 132 bits (146), Expect = 5e-26 Identities = 329/496 (66%), Gaps = 5/496 (1%) Strand=Plus/Minus Query 132879 ATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTC 132938 ||||||| | || | ||||| ||||| |||| || || || || || ||||| || Sbjct 1049 ATGCTTGTAAATGAGACAAGCGAAGTCAGTGTGCATACCTTCATCTCTAGAGATGAGCTC 990 Query 132939 GTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998 || ||| || | || |||||||| || ||||| |||||||| || || | ||| Sbjct 989 ATTAGAGAAGGTAAGTCCTGGCATGAGTCCACGTTTCTTGAGCCAGAAAATTGAACAGAA 930 Query 132999 ACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT 133058 | ||| |||||||| | ||||| || | |||||||| || || | || |||| | Sbjct 929 AGAGCCAGAAAAGAATATACCCTCAACTGAAGCGAAAGCAACTAGCCTTTCAGCGAAGCT 870 Query 133059 GGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCAT 133118 ||| || | | ||||| | || |||||||| ||||||| |||| || || Sbjct 869 AGCTGTTTCAC---CAATCCATCTCAATGCCCATTCTGCCTTTTTAGTGACAACTGGGAT 813 Query 133119 CGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGAT 133178 ||| || ||| || || ||| ||| |||| | | || | | || || || Sbjct 812 ATTTTAGACGGCTTTGAATAAATATTCTTTTTCTTGAGCGTCACTAATCAAAGTATCAAT 753 Query 133179 GAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCA 133238 || || || |||| ||||| | ||| ||||| || | || ||||| || || Sbjct 752 TAGAAGGGAGTAGGTTTCAGAGTGGATGTTTTCCATCATCATCTAGAATCCGTAGAAACA 693 Query 133239 CCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGA 133297 | || || ||||| | ||| | || ||| | | | | || || || || || | Sbjct 692 TCTAGCTTCTGGAACCTGAATTTCA-GTGCAGAATCTTTAGGCTAGGTTCTCATTTACAA 634 Query 133298 TGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGT 133357 | ||||| || ||||||||||| || ||||| |||||||| || | ||||||||||| Sbjct 633 TACCGTCAGAAGCAGCGAAAAAGGCGAGAACGTGTTTGATGAAGTGTCTCTCGTTGTCGT 574 Query 133358 TCAAGCGCTCCCAGTC 133373 | | | ||||||||| Sbjct 573 TGAGTCTCTCCCAGTC 558 >seq6006 Length=2920 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||||||| | |||||||| || || | ||||| || || || || |||| |||||| | Sbjct 2819 AAAAATGTAGATATTCGTCAAGACTTTGACGGGTAAGACTATTACTCTCGATGTCGAGCC 2760 Query 38300 CACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | | || | | | | ||||| |||| | || || | |||||||| || || ||| ||| Sbjct 2759 CTCTGATACCATCGAAAACG-TTAAGGCCAAGATTCAAGACAAAGAAGGTATCCCCCCCG 2701 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 | ||||| | ||||| | || || || || |||| |||| | ||| | || | Sbjct 2700 ATCAACAAAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGGAAGAACCTTGTCTGATT 2641 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||||||||||||| ||| | || || || ||||| Sbjct 2640 ACAACATCCAAAAAGAATCAACTCTTCACTTGGT 2607 >seq19055 Length=771 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||| | || ||||| || || | || |||||||||||||| | |||||||| | | Sbjct 650 ATGTAGATCTTCGTTAAGACCTTAACCGGCAAAACCATCACTCTTGACGTCGAACCATCA 591 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | ||| | || | || |||| || || || || ||||| |||| ||| Sbjct 590 GACACCATTGAAAATGTCAAGGCTAAGATCCAAGATAAGGAAGGTATTCCTCCCGATCAA 531 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || |||| ||| || || || || || |||| | ||| | ||||| ||| Sbjct 530 CAGAGACTTATTTTCGCCGGTAAGCAACTTGAGGACGGAAGAACCTTATCAGACTATAAC 471 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 || ||||| ||| | || || || ||||| Sbjct 470 ATTCAAAAAGAATCCACTCTCCACTTGGT 442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500039110062720