Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq14392 199 5e-46 seq6928 187 3e-42 seq1421 96.9 4e-15 >seq14392 Length=2979 Score = 199 bits (220), Expect = 5e-46 Identities = 911/1416 (64%), Gaps = 48/1416 (3%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| |||||| | ||| | ||| | ||| | | ||||||||| ||||||||||||| Sbjct 2161 GAAAGACCACAGCATATGCTAATGAGAGTCTCAGTTGGTATCCATAAGGAAGATATTGAT 2102 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTA---TGTTCATCCACGCAACACCA 111722 | | | | ||||| || || ||| ||| | ||| | |||||| ||||| Sbjct 2101 GCCGCTATTGAGACCTATAACCTTATG---AGTGACAAATGGTTTACCCACGCCACACCT 2045 Query 111723 ACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTG-CAAA 111781 || || ||||| || ||||| || | || ||||| ||| ||||| ||||||| | Sbjct 2044 ACTCTATTCAATGCAGGTACCCCTAAGCCTTAAATGAGCAGCTGTTT-CTTATTGATGAT 1986 Query 111782 CAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAA 111841 ||||| |||||||| |||| || || | ||||| | | ||| | |||||||| Sbjct 1985 GAAGGATGATTCAATTCATGGAATCTATGATACTCTTAAGAACATTGCTCTTATCTCAAA 1926 Query 111842 GTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTC-GTATTA 111900 | | ||||| || |||| | | ||| || | |||| | || | | ||| | Sbjct 1925 GAGTGCTGGAGGAGTCGGACTTGCTGTTCATAATATTAGAG-CTACTGGCAGCTATATCA 1867 Query 111901 GAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 111960 ||||| ||||| || || ||||| || | || |||||| | ||||| || | || | Sbjct 1866 AGGGTACTAATGGACACTCCAATGGTCTTGTCCCCATGCTTAGAGTATTCAATGAAACTG 1807 Query 111961 CGCGCTATGTAAACCAAGCTGGGCG---TCGCAAGGGATCTATCGCAGTCTATCTTGAGC 112017 | | || || |||||| ||| | | ||||| || |||| |||||||||| | Sbjct 1806 CTAGATACGTTGACCAAGGTGGTGGAAAGAGAAAGGGTTCATTCGCTATCTATCTTGAAC 1747 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 |||||||||| ||| | | || |||||| | | || || ||| | || || Sbjct 1746 CATGGCACGCAGATGTTTTTGATTTCCTTCAACTAAAAAAGAATCACGGTAAGGAAGAAT 1687 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 | | ||||| |||| || || ||||| |||||||| || ||||||||||| Sbjct 1686 AAAGAGCTAGAGATCTTTTCTATGCCCTTTGGATCCCAGATCTATTTATGAAGAGAGTCA 1627 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197 || | || ||||| | ||||| || || | | || || |||| |||| | Sbjct 1626 GAGATAACGGTGATTGGACACTCTTCTGCCCTAATGAAGCTAAGGGACTCTATGATGTCT 1567 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG-AAAG---TCGGGCGACT 112253 ||||| | || ||||| || ||||| || || || ||| ||| | |||||| Sbjct 1566 ATGGTGATGCCTTCGAAGCTCTTTACACTAAATATGA--AAGCTAAGGTATTGGGCGA-- 1511 Query 112254 GCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 112313 ||| | ||| | | ||| | ||||| | | | ||| || || ||| Sbjct 1510 AAGACCATAAAAGCCATGAAACTTTGGGAGACTATTATTGAAAGTTAAATTGAAACCGGT 1451 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 || || |||||||||||||| ||| | ||| | || |||||||| ||| | ||| Sbjct 1450 ACTCCCTATATGCTTTACAAGGACCACGCAAACAATAAATCCAATCAAAAAAATCTCGGT 1391 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433 || |||||||| || |||||| |||||| | |||| || ||||| Sbjct 1390 ACCATTAAGAGTTCTAATCTCTGTTGCGAAATCATTGAATACACTTCACCTGATGAAGTA 1331 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA 112493 ||||| || |||||||| || || | | |||| ||||| || | || Sbjct 1330 GCTGTTTGCAACCTCGCCTCCATATCATTACCCAGATATGTTAAT-AATGGA-----GTG 1277 Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 ||||| ||||| ||||| || ||| || | || | || | ||| || |||||| | Sbjct 1276 TTTGACTATGAGAAACTACATTCAGTCACCTATTCTATTACTAGAAATCTTAACAGAATC 1217 Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGA--CTGCTCGTAAATCTAATATGAGACACCGTC 112611 |||||| | || || || || ||| || || || ||||| | |||||| | | Sbjct 1216 ATTGATGGTAACTTCTATCC--TTGCGATGAAGCCAAAAACTCTAACCTTAGACACAGAC 1159 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTC-TTTGTCGCCACGCATTT 112670 |||||||| ||||||| ||||||| || |||| | || | ||| | || | || Sbjct 1158 CAATTGGTATCGGTGTTTAAGGTCTTGCTGATGCCCTTATGCTTTTAAAGATAC-CCTTC 1100 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTA-TATTTGAGACAATGTATCACGCCGC 112729 || ||| ||| | || ||||| | | | |||||||||| || ||||| || | Sbjct 1099 GAAGACGAAAGAGCCTATTAATTCAAT-CAAGAAGTATTTGAGACCATTTATCATGCTTC 1041 Query 112730 TCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 | | | | ||| || | || || || ||| |||||| | || || || Sbjct 1040 TATGTAATCCAGTGTTGACATCGCCAAGAAAGAAGGTTACTATGAATCTTTCATAGGATC 981 Query 112790 TCCAGCTTCACAAGGGGTGCTTC-AATTTGATATGTGGGAAGGTGAGA---CCAAGCTTC 112845 |||| || |||| ||| |||||||||||| |||| | || | ||||| || Sbjct 980 TCCA-CTCAGTTAGGGTATATTCTAATTTGATATGT-GGAACGAGAAATTGCCAAG--TC 925 Query 112846 A---CTACGACTGGGACGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGT 112901 | ||| | ||||| || ||| |||| | ||| | | ||| | ||| | Sbjct 924 AAAGATACAATTGGGA-AAACTTAAGAAACGAGGTTAAGTAATACGGTGCCAGAAACTCT 866 Query 112902 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 112961 || ||| | || || ||||| || || || || || |||| | || || |||||| || Sbjct 865 CTATTGGTTGCCCCTATGCCTACCGCTTCAACTTCATAAATTCTAGGAAACAATGAAAGC 806 Query 112962 TTTGAACCCTACACGACGAACATCTATCTGAGAAGA 112997 || ||||| ||||| || ||||||||| |||||| Sbjct 805 TTCGAACCTTACACCACTAACATCTATACCAGAAGA 770 >seq6928 Length=2931 Score = 187 bits (206), Expect = 3e-42 Identities = 687/1050 (65%), Gaps = 37/1050 (4%) Strand=Plus/Minus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| | ||| | ||| || ||||| || ||||||| | || || | || |||| Sbjct 2174 ACATGCTTATGAGAGTCAGTATTGGTATTCACAAGGAAGATCTCGAGTCAGCATTCGAGA 2115 Query 111679 CATACGACAAGATGTCCCG-TGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | ||||| ||| | | || ||||| ||||| || || || | |||||| | Sbjct 2114 CCTACGATCTTATGAGTCAATTGTG-GTTCACACACGCCACTCCTACTTTGTTCAACTCA 2056 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTC--CTTATTG-CAAACAAGGAGGATTCA 111794 ||||| |||| ||| || ||| |||| || | |||||| | | |||||||||||| Sbjct 2055 GGTACTCCAAAACCACAGATG---AGTTCTTGCTTCTTATTAACCATGAAGGAGGATTCA 1999 Query 111795 ATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGT 111854 || |||| || | | || |||| | ||| ||||||||| ||||| ||| Sbjct 1998 ATTGATGGAATCTTTGAAACACTCAAGTAGATTGCTGTCATCTCAAAGGCAGCTGGAGGT 1939 Query 111855 ATCGGGATGCACATCCAT--GATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATG 111912 ||||| | | | | || || |||||||| | || || ||||||||||||| Sbjct 1938 ATCGGTGT-CTC-TGTATCAGACATCAGAGCCGCAGATTCATACATCAGAGGTACAAATG 1881 Query 111913 GTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAA 111972 | | ||| ||||| | ||||| |||||| |||||||| | ||| || | ||||| Sbjct 1880 GATATTCAAATGGTTTAATTCCCATGCTTAAGGTATTTAATGACACTGCAAGATATGTTG 1821 Query 111973 ACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGG 112029 | |||| ||| || | |||||| | | || |||||| | |||||||||||||| | Sbjct 1820 ATCAAGGTGGTGGTAAAAGAAAGGGAGCGTTTGCTGTCTATGTGGAGCCATGGCACGCAG 1761 Query 112030 ATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GC 112088 ||||| || ||||| | || | || || ||| | ||||| | | ||| | Sbjct 1760 ATATCTATGACTTCCTCTAACTGAGAAAGAATCATGGTAAGGAGGA-AAACAGAGCCAGA 1702 Query 112089 GATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGC 112148 |||||||| | ||| || ||||| |||||||| |||||||| ||||| ||| ||| || Sbjct 1701 GATCTCTTTTACGCACTTTGGATACCAGATCTTTTCATGAAAAGAGTCGAGAAGAATGAA 1642 Query 112149 AATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGA 112207 | ||| | || | ||||| || || || || ||| | || | ||| |||| Sbjct 1641 GACTGGACCCTGATGTGTCCCAACGAATGC-CCAGGTTTGAGTAATTGCTGGGGATAGGA 1583 Query 112208 GTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGC 112267 ||||||| |||||| |||| | ||| | || || || || || | Sbjct 1582 GTTTGAAAACCTCTA---TGAGTAATATGAA-AGAGATGGAAGAGGTAGAAAGTCCATTA 1527 Query 112268 TGCC--GATG--TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATA 112323 | | |||| | |||| || | | ||| | | || ||||| || || || | Sbjct 1526 AGGCAAGATGGCTCTGGAGTCAAATCGTAGAATCTTAGATAGAAACTGGAACCCCCTACA 1467 Query 112324 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 112383 |||| |||||||| |||| || |||| || ||| | || | || || |||| Sbjct 1466 TGCTCTACAAAGATACCTGCAATAGAAAGTCAAACCAATAAAACCTAGGAACCATTAAGA 1407 Query 112384 GTTCCAACCTCTGTACAGAAATCTTGGAATTTA-CAGACAAAGATGAGACGGCTGTGTGT 112442 | ||||| |||||||| ||||| |||| | | ||| | || || | || || || Sbjct 1406 GCTCCAATCTCTGTACTGAAATAGTGGAGTACACCAGTC-CCGACGAAATAGCAGTTTGC 1348 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGA-CAAAGACATTTGATTA 112501 ||| | ||||| || || || | | || ||| | | |||| || |||||| Sbjct 1347 AACTTGGCATCCATTGCACTTAATAGATTCGTCATAAAAGATACCTAAGA-ATATGATTA 1289 Query 112502 TGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAG 112561 ||| || | ||| | || || || | | ||||||||||| || | | ||||||||| Sbjct 1288 TGAGAAGTTACACTATGTAACCAAGAGAATTACAAAAAACCTTAATAAAATTATTGATAA 1229 Query 112562 AAATTTTTACCCCGTTGAGACTGCTCGTAAA---TCTAATATGAGACACCGTCCAATTGG 112618 ||| || || ||| ||| |||| |||||| | ||||| | |||||||| Sbjct 1228 CAATCACTATCCAATTG---CTGAAGCTAAATACTCTAATCTTAGACATAGACCAATTGG 1172 Query 112619 TCTCGGTGTCCAAGGTCTCGCGGATGTATT 112648 | ||||||| ||||| |||| |||| ||| Sbjct 1171 TATCGGTGTTCAAGGATTCGCTGATGCATT 1142 >seq1421 Length=1529 Score = 96.9 bits (106), Expect = 4e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 ||| ||||| | || | || || || | ||||||||||| ||||| ||||| || || Sbjct 872 CTTCGCTGAAAGGCTAGTTGCTTTCGCTTCAGTTGAGGGTATATTCTTTTCTGGCTCTTT 931 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 ||| | |||| ||||||||||| || || ||||||||||| || |||||| || || Sbjct 932 CTGTTCAATTTTCTGGCTCAAGAAACGTGGACTCATGCCAGGACTTACCTTCTCTAATGA 991 Query 102293 GCTTATCTCTCGTGACGAGGG 102313 ||| |||||| | || || || Sbjct 992 GCTCATCTCTAGAGATGAAGG 1012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620576483315760