Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1421 118 1e-21 seq9521 84.2 3e-11 >seq1421 Length=1529 Score = 118 bits (130), Expect = 1e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 |||||||| | |||||||||||||||| |||| |||||| ||||||||||| | |||| Sbjct 1012 CCTTCATCTCTAGAGATGAGCTCATTAGAGAAGGTAAGTCCTGGCATGAGTCCACGTTTC 953 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| || || | ||| ||| ||||||||||| || ||||| || | |||||| Sbjct 952 TTGAGCCAGAAAATTGAACAGAAAGAGCCAGAAAAGAATATACCCTCAACTGAAGCGAAA 893 Query 119634 GCGAATAGACGCTCAGCAAA 119653 || | ||| | ||||| || Sbjct 892 GCAACTAGCCTTTCAGCGAA 873 >seq9521 Length=4824 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 168428 ACTTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGA 168487 |||| || | | ||||||||| ||| ||| ||||||||||||||| | | ||| | Sbjct 1530 ACTTTCCTCTTAATGGAAATACACCAAAATAATCTCTACCCACGACTTATATTCCACTCA 1471 Query 168488 CAGCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTG 168547 || |||| ||| |||||||| || || || | || || ||||| ||| ||||| || Sbjct 1470 TTGCAAGAGATTTAGCTGAATCTCCTTCAGTGAGTATCAGGGTACATTTTTAAGACTCTG 1411 Query 168548 CCGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACCA 168588 || ||||| | || || || || ||||| || || ||| Sbjct 1410 ATGTTCCAGCCATATTAGCGTCTTCTAATTTTGGAATTCCA 1370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588818574077400