Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq6928 223 4e-53 seq14392 187 3e-42 seq1421 98.7 1e-15 >seq6928 Length=2931 Score = 223 bits (246), Expect = 4e-53 Identities = 908/1402 (65%), Gaps = 48/1402 (3%) Strand=Plus/Plus Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||||| || ||||| ||||| || || | |||||| | || |||||||||||||| Sbjct 812 GTGTAAGGCTCAAAAGTCTCATTGTTTCCAAGGATTTGAGAAGTTGAGGCTGTTGGCATG 871 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGA--TGCGTTCCTTGAGAACAT 106064 ||||| | || || ||| | | ||| | || | ||| | | || | || || Sbjct 872 GGTGCTAATAAGAGTGAGTTTCTAGCACCATATTTCATGACATCCTGTC--TAAGTTAAT 929 Query 106065 CCCAGTCGTAGTT----GAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCT 106120 |||| || || | |||| |||||| |||||| | ||||||| | ||| Sbjct 930 CCCAATCATATCTATCAGAGCAAGGTTTCTT-TTCCCAGAGGTCAAATTAGAATTTACCT 988 Query 106121 TGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC-ACA 106179 || || || || || | || || ||||| | |||| ||| ||| | ||| | | Sbjct 989 TGAGATAGTGGTGATCCTTGGAAGGTTTCATAAGGTCCTTCAACTTTAGCGATTTCCATA 1048 Query 106180 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA-TCTCCTTGG 106238 | || |||| ||| || ||||| || ||||||||||| |||| | |||| || Sbjct 1049 GAG-GCTTCCATGGAGGCATGATAGATAGTTTCAAAGATTAACTCATTGAGTCTCAATGC 1107 Query 106239 CTTC--ATCTGAATCAAATGCGTAGCGGCACAAAATA-AATACATCCGCGAGACCTTGAA 106295 || |||| || |||| ||| | | | ||| |||| |||| ||||||| Sbjct 1108 TTTAGGATCT---TCGAATG-GTATTTTGAGCATTTGTAATGCATCAGCGAATCCTTGAA 1163 Query 106296 CACCCAAACCAATAGGTCTGTGTCGCATATTAGACT--TTCGCG-CAGTCTCAACGGGAT 106352 |||| | |||||| ||||| |||| | |||||| | || || ||| ||| |||| Sbjct 1164 CACCGATACCAATTGGTCTATGTCTAAGATTAGAGTATTTAGCTTCAG---CAATTGGAT 1220 Query 106353 AAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAA 106412 | ||| | ||||| | | || || ||||| |||| |||| || | | || | Sbjct 1221 AGTGATTGTTATCAATAATTTTATTAAGGTTTTTTGTAATTCTCTTGGTTACATAGTGTA 1280 Query 106413 GTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATG 106472 || ||||||||| | || |||| |||| | | ||| || || |||| Sbjct 1281 ACTTCTCATAATCATATTCTTAGGTATCTTTTATGACGAATCTATTAAGTGCAATGGATG 1340 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 |||| |||||||| || | || || | |||||||| | ||||| ||||| | | Sbjct 1341 CCAAGTTGCAAACTGCTATTTCGTCGGGACTGGTGTACTCCACTATTTCAGTACAGAGAT 1400 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 |||| |||||||| || || | || | |||||| |||| | ||||| | ||| |||| Sbjct 1401 TGGAGCTCTTAATGGTTCCTAGGTTTTATTGGTTTGACTTTCTATTGCAGGTATCTTTGT 1460 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACT-TGAGAATTGCCTTCCACA--CAT 106649 ||||||||||||| || || || || ||| || | | || ||| | |||| | ||| Sbjct 1461 AGAGCATGTAGGGGGTTCCAGTTTCTATCTAAGATTCTACGATTTGAC-TCCAGAGCCAT 1519 Query 106650 CGGCGGCTGGTACAATGGCGT---TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 106706 | || ||||| | | | | ||| || || || | |||||| Sbjct 1520 C-----TTGCCTTAATGGACTTTCTACCTCTTCCATCTCTTTCATATTACTCATAGAGGT 1574 Query 106707 CTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAG 106764 ||||||||||| | || | || | | |||||| || || || ||||| | || Sbjct 1575 TTTCAAACTCCT-ATCCCCAGCAATTACTCAAACCTGG-GCATTCGTTGGGACACATCAG 1632 Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824 | ||| | || || ||| || | ||||||||||| ||||| ||||| || | | Sbjct 1633 GGTCCAGTCTTCATTCTTCTCGACTCTTTTCATGAAAAGATCTGGTATCCAAAGTGCGTA 1692 Query 106825 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 106884 |||||||||||| | || || | ||| || || || | | ||||| || Sbjct 1693 AAAGAGATCTCTGGCTCTGTTTTCCTCCTTACCATGATTCTTTCTCAGTTAGAGGAAGTC 1752 Query 106885 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTC---GACGCCC 106941 |||||| |||||||||||||| | |||||| || | | |||||||| || || Sbjct 1753 ATAGATATCTGCGTGCCATGGCTCCACATAGACAGCAAACGCTCCCTTTCTTTTACCACC 1812 Query 106942 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATC 107001 | |||||| ||||| | || ||| | |||||||| |||||| ||||| | ||||| Sbjct 1813 ACCTTGATCAACATATCTTGCAGTGTCATTAAATACCTTAAGCATGGGAATTAAACCATT 1872 Query 107002 TGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC--ATGGATGTGC 107059 ||| | |||||||| || | || || | |||||| | || || | | | Sbjct 1873 TGAATATCCATTTGTACCTCTGATGTATGAATCTGCGGCTCTGATGTCTGATACA-GAG- 1930 Query 107060 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 107119 | || ||||| ||||| ||||||||| ||| || | | || ||| || |||| Sbjct 1931 ACACCGATACCTCCAGCTGCCTTTGAGATGACAGCAATCTACTTGAGTGTTTCAAAGATT 1990 Query 107120 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 107179 || | ||||| |||||||| ||| | | ||||||| |||||| ||| |||| Sbjct 1991 CCATCAATTGAATCCTCCTTCATGGTTAATAAGAAGCAAGAACTCATCTGTGGTTTTGGA 2050 Query 107180 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCG 107239 ||||| | ||||| | || || || ||||| ||||| ||| ||| ||| Sbjct 2051 GTACCTGAGTTGAACAAAGTAGGAGTGGCGTGTGTGAACCACAATTGACTCATAAGATCG 2110 Query 107240 TATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAAC 107299 || ||||| || | || || | |||||| ||| || || || || | ||||| | Sbjct 2111 TAGGTCTCGAATGCTGACTCGAGATCTTCCTTGTGAATACCAATACTGACTCTCATAAGC 2170 Query 107300 ATGTATTGGGGTGTTTCCATGA 107321 |||| || ||| |||| |||| Sbjct 2171 ATGTGTTAAGGTCTTTCAATGA 2192 >seq14392 Length=2979 Score = 187 bits (206), Expect = 3e-42 Identities = 853/1314 (65%), Gaps = 54/1314 (4%) Strand=Plus/Plus Query 105925 TCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTG 105984 |||||| ||||||||| || ||||| ||||| |||| |||||| || || | |||| Sbjct 770 TCTTCTGGTATAGATGTTAGTGGTGTAAGGTTCGAAGCTTTCATTGTTTCCTAGAATTTA 829 Query 105985 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTT 106044 || || || || || ||||| || || | ||| ||| ||| | ||| | || ||| Sbjct 830 TGAAGTTGAAGCGGTAGGCATAGGGGCAACCAATAGAGAGTTTCTGGCACCGTATTACTT 889 Query 106045 GATG-CGTTCCTTGAGAACATCCCAGTCGTAG--TTGAGCTTGG---TTTCACCTTCCCA 106098 | |||| ||| || ||||| | ||| |||| ||||| |||| | |||| | Sbjct 890 AACCTCGTTTCTTAAGTTT-TCCCAATTGTATCTTTGA-CTTGGCAATTTCTCGTTCC-A 946 Query 106099 CATATCAAATT-GAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAAC 106157 ||||||||||| ||| |||| |||| ||| || || | |||||| ||| Sbjct 947 CATATCAAATTAGAATATACCCTAACTGAGTGG-AGATCCTATGAAAGATTCATAGTAAC 1005 Query 106158 CTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGA 106217 ||| | || | ||| || | | || || || ||||| ||||| ||||| | Sbjct 1006 CTTCTTTCTTGGCGATGTCAACACTGGATTACATAGAAGCATGATAAATGGTCTCAAATA 1065 Query 106218 -TACGAGCATTCATCTCCTTGGCT---TCATCTGAATCAAATGCGTAGCGGCACAAA-AT 106272 | | | ||| | | | |||| || ||| || || | ||| | | || || Sbjct 1066 CTTCTTG-ATTGAATTAATAGGCTCTTTCGTCT---TCGAAGG-GTATCTTTAAAAGCAT 1120 Query 106273 AAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTT 106332 || |||| || ||||||| |||||| | |||||| |||||||||| | ||||| || Sbjct 1121 AAGGGCATCAGCAAGACCTTAAACACCGATACCAATTGGTCTGTGTCTAAGGTTAGAGTT 1180 Query 106333 TCGCGCAG--TCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTA 106390 | || || ||| ||||| || || | ||||||| || ||| |||||| | ||| Sbjct 1181 TTTGGCTTCATCGCAA--GGATAGAAGTTACCATCAATGATTCTGTTAAGATTTCTAGTA 1238 Query 106391 ACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACA 106450 | | | |||| | ||| ||||| ||||| ||||| | || || ||| ||| Sbjct 1239 ATAGAATAGGTGACTGAATGTAGTTTCTCATAGTCAAAC-----ACTCCATT-ATTAACA 1292 Query 106451 TACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTAC 106510 || | || | | || || || | ||||||||||| ||||| ||||| Sbjct 1293 TATCTGGGTAATGATATGGAGGCGAGGTTGCAAACAGCTACTTCATCAGGTGAAGTGTAT 1352 Query 106511 TCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTC 106570 || | ||||| ||| | || ||||||||||| || || | ||| ||||| || Sbjct 1353 TCAATGATTTCGCAACAGAGATTAGAACTCTTAATGGTACCGAGATTTTTTTGATTGGAT 1412 Query 106571 TTTTTGTT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTT 106629 || ||||| || | |||||||| ||||| ||||| || || || || | | |||| Sbjct 1413 TTATTGTTTGCGTGG-TCCTTGTAAAGCATATAGGGAGTACCGGTTTCAATTTA--ACTT 1469 Query 106630 G--AGAATTGCCTTCCACACATCGGCGGCTGGTACAATGG-CGTTGGCCCG-TCCCTCCG 106685 | ||| | || ||| | | |||| || ||| | || |||| | ||| | Sbjct 1470 TCAATAATAGTCTCCCAAAGTTTCATGGCTTTTA---TGGTCTTTCGCCCAATACCTTAG 1526 Query 106686 CCT-CGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGT 106744 | | | || || ||||| || ||||| || | ||||| | || |||| || Sbjct 1527 CTTTCATATTTAGTGTAAAGAGCTTCGAAGGCATCACCATAGACATCATAGAGTCCCTTA 1586 Query 106745 GCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGG 106804 || | | || ||||| || | ||| | ||| || || | |||||| || || Sbjct 1587 GCTTCATTAGGGCAGAAGAGTGTCCAATCACCGTTATCTCTGACTCTCTTCATAAATAGA 1646 Query 106805 TCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTG 106864 ||||| ||||| |||| | || ||||||||| | ||||| | ||| || || Sbjct 1647 TCTGGGATCCAAAGGGCATAGAAAAGATCTCTAGCTCTTTATTCTTCCTTACCGTGATTC 1706 Query 106865 AGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATA 106924 | || | |||||| || | | ||| ||||||||||| |||||||||| |||| Sbjct 1707 TTTTTTAGTTGAAGGAAATCAAAAACATCTGCGTGCCATGGTTCAAGATAGATAGCGAAT 1766 Query 106925 GATCCCTTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGA 106981 || ||||||| | ||| |||| | || || | || || | || ||||| | | Sbjct 1767 GAACCCTTTCTCTTTCCACCACCTTGGTCAACGTATCTAGCAGTTTCATTGAATACTCTA 1826 Query 106982 AGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGC 107040 ||||| || | || ||||| || || ||||| || ||| ||| || | | | || Sbjct 1827 AGCATGGGGACAAGACCATTGGAGTGTCCATTAGTACCCTTGATA-TAGCTGCCAGTAGC 1885 Query 107041 TCTCACATCATGGATGTGCA--TCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACAC 107098 ||| | || || || ||| ||| | | || ||||| | ||||||||| | ||| Sbjct 1886 TCTAATATTAT-GAACAGCAAGTCCGACT-CCTCCAGCACTCTTTGAGATAAGAGCAATG 1943 Query 107099 TCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTT-GTTGGCGATAAGGAAGCA 107157 | | ||||||| ||||||| || | ||||| || ||||| | | |||| ||| || Sbjct 1944 TTCTTAAGAGTATCATAGATTCCATGAATTGAATCATCCTTCATCATCAATAA-GAAACA 2002 Query 107158 ACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG 107211 ||| ||| | || | || ||||| |||||||| || || ||||| ||||| Sbjct 2003 GCTGCTCATTTAAGGCTTAGGGGTACCTGCATTGAATAGAGTAGGTGTGGCGTG 2056 >seq1421 Length=1529 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| | ||| ||||||| || || || ||||| |||||| || ||||||||||| || Sbjct 1019 GTGCATACCTTCATCTCTAGAGATGAGCTCATTAGAGAAGGTAAGTCCTGGCATGAGTCC 960 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || ||||| | ||| |||| | ||||| || || || ||||| |||||||| || | Sbjct 959 ACGTTTCTTGAGCCAGAAAATTGAACAGAAAGAGCCAGAAAAGAATATACCCTCAACTGA 900 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 || || |||| || | || |||| ||| || || ||| |||| ||| ||| Sbjct 899 AGCGAAAGCAACTAGCCTTTCAGCGA---AGCTAGCTGTTTCACCAATCCATCTCAATGC 843 Query 117465 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 117524 ||||| ||||| || | | ||| | | ||| || ||||| ||||| | ||||| Sbjct 842 CCATTCTGCCTTTTTAGTGACAACTGGGATATTTTAGACGGCTTTGAATAAAT-ATTCTT 784 Query 117525 TT 117526 || Sbjct 783 TT 782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589823105506920