Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1421 185 1e-41 >seq1421 Length=1529 Score = 185 bits (204), Expect = 1e-41 Identities = 587/893 (66%), Gaps = 33/893 (4%) Strand=Plus/Minus Query 36885 TTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943 ||||| || ||||| |||| |||| ||||| || ||||| || || || ||| || | Sbjct 1324 TTTTGGTACTCTCCTACTC-TCTTCTCGAAGAAGTTTGTTTTGCCAGTTAATGAGATCAT 1266 Query 36944 TTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAG 37003 ||||| | ||||||||||| | | | || |||||| | || || |||| || Sbjct 1265 GTCCATCCATTCAAATGGATTT--TCAACT-TA-ATAGTATTT--TGG-AACTCCTAGAG 1213 Query 37004 -------AAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATAC 37056 ||| ||||| || ||||| ||||| | | ||| |||| |||| |||| Sbjct 1212 CGAAGAGAAGTCTATCAGCTACAAACATAATGTACTGGCTCATGAGTTTTGAGTTCATAC 1153 Query 37057 CAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTT 37116 |||| || | ||||| | || || | |||| ||| || ||||||| | | Sbjct 1152 CAATGAGCTCAACTGGTAGTGACTCGCTCACAAATTCCAGTTCGATGGTTACAGCGTTTG 1093 Query 37117 TAACTATATTAACAATAACTTCT-TCAGTTGGGGGAT--ATTTTAAATAT--TTAAACAA 37171 ||| || | || || ||| ||| |||| | | ||| | || || || | | Sbjct 1092 TAATGATCTCAAGGAT----TCTCTCA-TTGGAGATTTTATTGTTAAGATGCTTGTAAAT 1038 Query 37172 TAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGT 37231 | ||| || || ||| || | ||||||||||||| || | |||||||| ||||| Sbjct 1037 GAGACAAGCGAAGTCAGTGTGCATACCTTCATCTCTAGAGATGAGCTCATTAGAGAAGGT 978 Query 37232 TAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAA 37291 | ||||||||| | || | ||| || | ||| || |||| ||||| |||||||| Sbjct 977 AAGTCCTGGCATGAGTCCACGTTTCTTGAGCCAGAAAATTGAACAGAAAGAGCCAGAAAA 918 Query 37292 GAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATC 37351 ||| ||||| ||||||| || || || || || | | | |||| | | || | || Sbjct 917 GAATATACCCTCAACTGAAGCGAAAGCAACTAGCCTTTCAGCGAAGCT--AGCTGT-TTC 861 Query 37352 AGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGC 37411 | ||||||| | || ||| ||||||||| | ||| | || ||| | || Sbjct 860 ACCAATCCATCTCAATGCCCATTCTGCCTTTTTAGTGACAACTGGGATATTTTAGACGGC 801 Query 37412 TTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATA 37471 ||| || | | | | |||||||| | || | || ||||||||||||| | || Sbjct 800 TTTGAATAAATATTCTTTTTCTTGAGCGTCACTAATCAAAGTATCAATTAGAAGGGAGTA 741 Query 37472 CATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGA 37531 |||||||||| || ||||| || |||| || || || ||||| |||||||| | Sbjct 740 GGTTTCAGAGTGGATGTTTTCCATCATCATCTAGAATCCGTAGAAACATCTAGCTTCTGG 681 Query 37532 TAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGC 37591 | |||| || | | || || | |||| ||| ||||| || || || ||| ||| Sbjct 680 AACCTGAATTTCAGTGCAGAATCTTTAGGCTAGGTTCTCATTTACAATACCGTCAGAAGC 621 Query 37592 TGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAATTTTTTC 37649 || || || || ||||| | ||| || || ||||| || | | ||| | | | | | Sbjct 620 AGCGAAAAAGGCGAGAACGTGTTTGATGAAGTGTCTCTCGTTGTCGTTG--AGTCTCTCC 563 Query 37650 CAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCA 37709 || || |||| |||| | | | ||| | ||| || ||||| || ||||| | | Sbjct 562 CAGTCTTTAACATCTGTGGCAAGATCGATTTCCTCTGATGTCCAGAATGCTGCCATTTAA 503 Query 37710 CGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCT 37762 ||| ||||| |||| |||||||||| || ||||| || || |||||||| Sbjct 502 TCTTTGTACATTTTCCAGATATCATTATATTTGATTGGCAAGATCACAAATCT 450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592158481123320