Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq6006 86.0 5e-12 >seq6006 Length=2920 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || ||||| || || || |||||||| || ||||||||||| | ||| |||| Sbjct 2604 AAGACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAATCAGACAAGGTTCTTCCGTCT 2663 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 ||||||| ||| || ||||| || |||| |||||||| | ||| | || || ||||| Sbjct 2664 TCCAACTACTTTCCAGCAAAGATGAGTCTTTGTTGATCGGGGGGGATACCTTCTTTGTCT 2723 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 |||||| || || | | | || || | ||| || || | ||||| || Sbjct 2724 TGAATCTTGGCCTTAACGTTTTCGATGGTATCAGAGGGCTCGACATCGAGAGTAATAGTC 2783 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||||||| || || || |||| ||| Sbjct 2784 TTACCCGTCAAAGTCTTGACGAATATCTACAT 2815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380838325637709