Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1421 109 1e-18 >seq1421 Length=1529 Score = 109 bits (120), Expect = 1e-18 Identities = 355/547 (65%), Gaps = 7/547 (1%) Strand=Plus/Minus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || || ||||| |||||| ||||| || | ||||||| | || |||||| || Sbjct 1033 CAAGCGAAGTCAGTGTGCATACCTTCATCTCTAGAGATGAGCTCATTAGAGAAGGTAAGT 974 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||||| || | | |||||||||||||||| |||||||||||| ||||| Sbjct 973 CCTGGCATGAGTCCACGTTTCTTGAGCCAGAAAATTGAACAGAAAGAGCCAGAAAAGAAT 914 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| |||| ||||| || ||||| || |||| ||| | || || Sbjct 913 ATACCCTCAACTGAAGCGAAAGCAACTAGCCTTTCAGCGAAGCTAGC--TGTT-TCACCA 857 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | ||||| |||||||| || ||| ||| || | | | ||| | Sbjct 856 ATCCATCTCAATGCCCATTCTGCCTTTTTAGTGACAACTGGGATATTTTAGACGGCTTTG 797 Query 48371 A--AGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428 | | | ||||| || ||||| || | ||| | || | ||| Sbjct 796 AATAAATATTCTT--TTTCTTGAGCGTCACTAATCAAAGTATCAATTAGAAGGGAGTAGG 739 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 | |||||||| | || || || |||| ||| |||||||| || || || | Sbjct 738 TTTCAGAGTGGATGTTTTCCATCATCATCTAGAATCCGTAGAAACATCTAGCTTCTGGAA 679 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||| | ||| ||| ||||||| | || |||||||| || || || || ||||||| Sbjct 678 CCTGAATTTCAGTGCAGAATCTTTAGGCTAGGTTCTCATTTACAATACCGTCAGAAGCAG 619 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGC 48608 | || ||||| || || ||||| | ||| || | |||||||| | |||| | |||| Sbjct 618 CGAAAAAGGCGAGAACGTGTTTGATGAAGTGTCTCTCGTTGTCGTTGAGTCTCTCCCAGT 559 Query 48609 CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTT 48668 | | || ||| || | || || | ||| || |||||||| | || | | | || Sbjct 558 CTTTAACATCTGTGGCAAGATCGATTTCCTCTGATGTCCAGAATGCTGCCATTTAATCTT 499 Query 48669 TGTACAT 48675 ||||||| Sbjct 498 TGTACAT 492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931283812926720