Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4810 190 2e-43 >seq4810 Length=3402 Score = 190 bits (210), Expect = 2e-43 Identities = 347/495 (70%), Gaps = 16/495 (3%) Strand=Plus/Minus Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230 |||||||| ||| ||||| || ||||| || || || |||||||||||||||||| | Sbjct 2599 AGATGTTTCTTTACTCCAATTGGGCCTACACCTGGGCCACCACCTCCATGTGGAATAGAA 2540 Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290 || || ||||| | ||| | ||| | |||||||||||| | || |||| | || Sbjct 2539 AAGGTTTTATGAAGATTCAAATGCCCAACATCTGCACCAATGAAACCTGGTGAGGTTAAT 2480 Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350 || | ||| || || | || || || || | ||| || | |||||| | | ||| | | Sbjct 2479 CCCATCTGGGCGTTGAAGTTAGCTCCGTCCATATACACTTAACCACCGTGCTAATGTATG 2420 Query 138351 ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410 || | ||| || | | | |||| ||||||||||||||| || |||||||| |||||| Sbjct 2419 ATATCACACATTTCAATTACTTTTGCTTCAAATACACCATGGGTTGATGGATAAGTAATC 2360 Query 138411 ATAATACATGAGAGTTCAAATG-TATTCATGATT----GCTTTC-TTCTCTAGATCTTTG 138464 |||| ||| || | ||||| | || ||| || |||||| ||||| | ||| | Sbjct 2359 ATAA---ATG-CAGCT-AAATGTTCTTTATGCTTTTCAGCTTTCTTTCTC-AAATCATCA 2306 Query 138465 ATGTCTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATG-AC 138523 | || ||||| |||| ||||||||| || | |||| ||||| | | | | | | Sbjct 2305 ACATCAATGTTTCCATTTGCATCACACTCTACTACAACAATTTTCA-TGTTACAAAGTGC 2247 Query 138524 TGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATC 138583 ||| |||||||||||| ||||| || || |||| |||| || | || |||||||| Sbjct 2246 TGCTGAAGCAGGATTAGTACCATGAGCAGAAACTGGAATCAAGCAAATATCTCTTTTATA 2187 Query 138584 ATCTCCTGATCCTTGATGATA-TGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTG 138642 ||| || | || |||||| | ||| || || | || || |||||||| || | || Sbjct 2186 ATCACCACGGCTTTCATGATACTTCTT-AATAGCCATGAGACCAGCATACTCTCCATTTG 2128 Query 138643 ATCCTGCGTTAGGTT 138657 |||| ||| |||| Sbjct 2127 CACCTGAGTTTGGTT 2113 Score = 107 bits (118), Expect = 2e-18 Identities = 193/282 (68%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 139259 TAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTG 139318 ||| |||| | |||||| || || |||| |||| ||||| || || ||||||| Sbjct 1451 TAGACCATTAGGACCATGCCATTAGCCAAAGAAAGCAGAAATATTGGCTAGTAGTGCTTA 1392 Query 139319 TGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAG 139378 || || ||||||||| || || ||||||||||| |||||||| ||||||||||| || Sbjct 1391 AGCGGTACAGATGTTAGAAGTGGCCTTGTCTCTTCTGATATGCTGTTCTCTAGTTTGAAG 1332 Query 139379 TGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGG 139438 ||| | |||||| || || || | || || ||| | | | ||| || Sbjct 1331 TGCCATTCTGTAAGCTACATCACCATGCACATCTTTAGATACACCAATTAGACGGCCTGG 1272 Query 139439 TATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCC 139498 || ||||| || | | ||| | || | || | | |||||||||||| ||| | Sbjct 1271 CATTTTTCTTTTGAATTCATCTCTGCAAGCCATATATCCTGGATGAGGACCTCCATATGC 1212 Query 139499 CATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 ||| || | ||| || ||||| | | ||| ||||||||||| Sbjct 1211 CATGGGGACACCGAATCTTTGAACAGAACCAACAGCAATATC 1170 Score = 105 bits (116), Expect = 8e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 139844 ATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTT 139903 |||||| || | | ||||||||||||||| | || | |||||| |||| || || || Sbjct 866 ATTATAAGCCATGAACATTGCCTCTGCTGCAGATGTGGATTCATCCAATAATGAAGCATT 807 Query 139904 TGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAA 139963 | || || | ||| || || || || | |||| | | || || || | |||||| Sbjct 806 AGATACATCTAGTTTTGTTAGCTCAGTAATCATGGTTTAGAAGTTTAACAATGATTCCAA 747 Query 139964 TCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023 |||||| |||| |||||||||| ||| |||||||| | ||||||||| | || || || Sbjct 746 TCTTCCTTGAGCAATCTCAGCTTAATAAGGAGTGTATGGAGTGTACCAATTTGGGTTTTC 687 Query 140024 AAGAACGTTTC 140034 || || |||| Sbjct 686 GAGGACATTTC 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578843640965160