Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq6928 196 6e-45 seq14392 181 1e-40 seq1421 98.7 1e-15 >seq6928 Length=2931 Score = 196 bits (216), Expect = 6e-45 Identities = 944/1474 (64%), Gaps = 44/1474 (3%) Strand=Plus/Minus Query 75201 TCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACA 75260 |||| |||| || | ||||| | ||| | ||| || || || ||| |||||| Sbjct 2192 TCATTGAAAGACCTTAACACATGCTTATGAGAGTCAGTATTGGTATTCACAAGGAAGATC 2133 Query 75261 TTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACAC 75320 | || || | || ||||| ||||| ||| ||| ||||| ||||| || | Sbjct 2132 TCGAGTCAGCATTCGAGACCTACGATCTTATGAGTCAATTGTGGTTCACACACGCCACTC 2073 Query 75321 CAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCA 75380 | || | ||||| | ||||| |||| ||| |||||| ||||||| | | ||| Sbjct 2072 CTACTTTGTTCAACTCAGGTACTCCAAAACCACAGATGAGTTCTTGCTTCTTATTAACCA 2013 Query 75381 ACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAA 75440 |||||||| ||||| | || |||| || ||| || | | || ||| ||||||| Sbjct 2012 TGAAGGAGGATTCAATTGATGGAATCTTTGAAACACTCAAGTAGATTGCTGTCATCTCAA 1953 Query 75441 AGTGGGCTGGGGGTATTGGGATGCACATCCAT--GATGTGAGAGCCAATAAATCTCGTAT 75498 || ||||| ||||| || | | | | || || | |||||| | || || Sbjct 1952 AGGCAGCTGGAGGTATCGGTGT-CTC-TGTATCAGACATCAGAGCCGCAGATTCATACAT 1895 Query 75499 TCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCAC 75558 | || |||||||| | ||| ||||| | ||||| |||||| |||||||| | ||| Sbjct 1894 CAGAGGTACAAATGGATATTCAAATGGTTTAATTCCCATGCTTAAGGTATTTAATGACAC 1835 Query 75559 AGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCGGTCTACTTGGA 75615 || | ||||| |||||| || || | ||||| | | || ||||| |||| Sbjct 1834 TGCAAGATATGTTGATCAAGGTGGTGGTAAAAGAAAGGGAGCGTTTGCTGTCTATGTGGA 1775 Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675 |||||||| || |||||| || ||||| | | || || || ||| | || || Sbjct 1774 GCCATGGCACGCAGATATCTATGACTTCCTCTAACTGAGAAAGAATCATGGTAAGGAGGA 1715 Query 75676 GGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 | ||||||||||||| | || ||||| ||||| ||||||||||| | || Sbjct 1714 AAACAGAGCCAGAGATCTCTTTTACGCACTTTGGATACCAGATCTTTTCATGAAAAGAGT 1655 Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGAC- 75793 ||| || || | ||| | || | ||||| || || || |||||| | | Sbjct 1654 CGAGAAGAATGAAGACTGGACCCTGATGTGTCCCAACGAATGC-CCAGGTTTGAGTAATT 1596 Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAAT 75853 || | || | ||||||||||| |||||| | |||||| || || |||| | Sbjct 1595 GCTGGGGAT-AGGAGTTTGAAAACCTCTATGAGTAATATGAAAGAGATGGAAGAGGTA-- 1539 Query 75854 GCGACTGTACCAGCCGCC--GATG--TTTGGAAGGCTATTCTCA-AATCACAGACGGAGA 75908 || || | | | |||| | |||| | | | || | |||| ||| || | Sbjct 1538 --GAAAGTCCATTAAGGCAAGATGGCTCTGGA-GTCAAATCGTAGAATCTTAGATAGAAA 1482 Query 75909 CTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATT 75968 ||||||| || || ||||| ||||| ||| | || || | ||| |||||| | || Sbjct 1481 CTGGAACCCCCTACATGCTCTACAAAGATACCTGCAATAGAAAGTCAAACCAATAAAACC 1422 Query 75969 TGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATG 76028 | ||||| || |||||||| ||||| || || ||||| | |||||||| | || | Sbjct 1421 TAGGAACCATTAAGAGCTCCAATCTCTGTACTGAAATAGTGGAGTACACCAGTCCCGACG 1362 Query 76029 AGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTC 76088 | | || |||||||| |||||||| || || ||| | | |||| |||| || Sbjct 1361 AAATAGCAGTTTGCAACTTGGCATCCATTGCACTTAATAGATTCGTCATAAAAGATACCT 1302 Query 76089 GCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACC 76148 | ||||||||| || | || | | || |||| |||| ||||| || || Sbjct 1301 AAGAATATGATTATGAGAAGTTACACTATGTAACCAAGAGAATTACAAAAAACCTTAATA 1242 Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGC-GCGAAAG--TCTAATATGCGAC 76205 | | ||||| | ||| ||||| ||| ||| || ||| |||||| | ||| Sbjct 1241 AAATTATTGATAACAATCACTATCCAATTG---CTGAAGCTAAATACTCTAATCTTAGAC 1185 Query 76206 ACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATT-TATTTTGTGCCGCTAC 76264 | ||||| |||||| | ||||||||||| |||| |||| ||| | | | ||| Sbjct 1184 ATAGACCAATTGGTATCGGTGTTCAAGGATTCGCTGATGCATTACAAATGCTCAAAATAC 1125 Query 76265 GCATTTGATTCAGAT--GAAGCCAAGGAGA-TGAATGCTCGTATCTTTGAAACCATGTAT 76321 |||| || |||| || || |||| | |||| ||||||||||| || ||| Sbjct 1124 -CATTCGA---AGATCCTAAAGCATTGAGACTCAATGAGTTAATCTTTGAAACTATCTAT 1069 Query 76322 CACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTT 76381 || || ||| |||| || | ||| | ||| ||| |||| | ||||| || || Sbjct 1068 CATGCCTCCATGGAAGCCTCTATGGAAATCGCTAAAGTTGAAGGACCTTATGAAACCTTC 1009 Query 76382 GAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAG 76441 | || || || || ||||| | | ||||| | |||||| |||||| | Sbjct 1008 CAAGGATCACCACTATCTCAAGGTAAATTCTAATTTGACCTCTGGGAA-AAGAAACCTTG 950 Query 76442 CTC----AACTACGACTGGGATGTTCTCAAGGAACGCA--TCAAGGAGAAGGGTCTTCGT 76495 ||| | || || |||||| || | || | | ||| | | | ||| | | Sbjct 949 CTCTGATAGATATGATTGGGATTAACTTA--GACAGGATGTCATGAAATATGGTGCTAGA 892 Query 76496 AACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 76555 ||| || || | ||||| |||||||||||||| || | |||||| | || || ||| Sbjct 891 AACTCACTCTTATTAGCACCCATGCCAACAGCCTCAACTTCTCAAATCCTTGGAAACAAT 832 Query 76556 GAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTT 76615 || ||||| || ||||| |||| | ||| |||||| | | || ||||| || Sbjct 831 GAGACTTTTGAGCCTTACACCTCAAATGTTTACACCAGAAGAGTCTTAGCTGGTGAATTC 772 Query 76616 GTCATTGTCAACAAGCACCTCGTCAATGACCTCA 76649 || ||| || ||||| ||| | || |||| Sbjct 771 GTTTGTGTGAATCCTCACCTTGTCCAAGATCTCA 738 >seq14392 Length=2979 Score = 181 bits (200), Expect = 1e-40 Identities = 926/1440 (64%), Gaps = 56/1440 (4%) Strand=Plus/Minus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| |||||| | ||| | ||| | ||| || | || ||||| |||||| |||||| Sbjct 2161 GAAAGACCACAGCATATGCTAATGAGAGTCTCAGTTGGTATCCATAAGGAAGATATTGAT 2102 Query 75266 TCTGTCTTGGAGACATACGACAAGATG--TCCCAAGGTATG-TTCATTCACGCAACACCA 75322 | | | ||||| || || ||| | ||| ||| || | ||||| ||||| Sbjct 2101 GCCGCTATTGAGACCTATAACCTTATGAGTGACAA---ATGGTTTACCCACGCCACACCT 2045 Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 || || |||||||| ||||| || | || | ||| ||| || ||| |||| | | Sbjct 2044 ACTCTATTCAATGCAGGTACCCCTAAGCCTTAAATGAGCAGCTGTTTC-TTATTGATGAT 1986 Query 75383 -AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 75441 ||||| || ||||| | || ||||||| ||||||| | | ||| | |||||||| Sbjct 1985 GAAGGATGATTCAATTCATGGAATCTATGATACTCTTAAGAACATTGCTCTTATCTCAAA 1926 Query 75442 GTGGGCTGGGGGTATTGGGA--TGCACATCCATGATGTGAGAGCCAATAA-ATCTCGTAT 75498 | | ||||| || | | ||| ||| || || || | ||||| | | | || ||| Sbjct 1925 GAGTGCTGGAGG-AGTCGGACTTGCTGTTC-ATAATATTAGAGCTACTGGCAGCTA-TAT 1869 Query 75499 TCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCAC 75558 ||| || ||||| || || ||||| || | || |||||| | ||||| || | || Sbjct 1868 CAAGGGTACTAATGGACACTCCAATGGTCTTGTCCCCATGCTTAGAGTATTCAATGAAAC 1809 Query 75559 AGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCGGTCTACTTGGA 75615 || | || || | |||| || | | ||||| || |||| |||| | || Sbjct 1808 TGCTAGATACGTTGACCAAGGTGGTGGAAAGAGAAAGGGTTCATTCGCTATCTATCTTGA 1749 Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675 ||||||||| || ||| | | || |||||| | || | || || ||| | ||||| Sbjct 1748 ACCATGGCACGCAGATGTTTTTGATTTCCTTCAACTAAAAAAGAATCACGGTAAGGAAGA 1689 Query 75676 GGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 | ||||||||| || | |||| ||||| ||||| || || |||||| | || Sbjct 1688 ATAAAGAGCTAGAGATCTTTTCTATGCCCTTTGGATCCCAGATCTATTTATGAAGAGAGT 1629 Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGC 75795 || ||| | ||| | || ||||| || | | || || |||| || | Sbjct 1628 CAGAGATAACGGTGATTGGACACTCTTCTGCCCTAATGAAGCTAAGGGACTCTATGATGT 1569 Query 75796 GGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA--GAGCCAAT 75853 ||||| | || ||||| || ||||| || |||||| | |||| | || || Sbjct 1568 CTATGGTGATGCCTTCGAAGCTCTTTACACTAAATATGAAAGCTAAGGTATTGGGCGAA- 1510 Query 75854 GCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 ||| || |||| | ||||| || ||||| | || | | || || || Sbjct 1509 -AGACCATAAAAGCCATGAAACTTTGGGAGACTATTATTGAAAGTTAAATTGAAACCGGT 1451 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 || || ||||||||||||||||| ||||| || || ||||| ||| | || Sbjct 1450 ACTCCCTATATGCTTTACAAGGACCACGCAAACAATAAATCCAATCAAAAAAATCTCGGT 1391 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 || || ||||| || ||||| || ||||| | || ||||| ||||| Sbjct 1390 ACCATTAAGAGTTCTAATCTCTGTTGCGAAATCATTGAATACACTTCACCTGATGAAGTA 1331 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACT 76093 ||||||||||| | || || || | | || | ||||| ||| || || | Sbjct 1330 GCTGTTTGCAACCTCGCCTCCATATCATTACCCAGATATGTTAAT-AATGGAGT-----G 1277 Query 76094 TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 ||||| ||||| ||||| ||| | |||| | | |||| | |||||| ||| || || Sbjct 1276 TTTGACTATGAGAAACTACATTCAGTCACCTATTCTATTACTAGAAATCTTAACAGAATC 1217 Query 76154 ATTGACAGAAATTTTTATCCCGTTGAGA--CTGCGCGAAAGTCTAATATGCGACACAGAC 76211 ||||| | || || ||||| ||| || || ||| ||||| | ||||||||| Sbjct 1216 ATTGATGGTAACTTCTATCC--TTGCGATGAAGCCAAAAACTCTAACCTTAGACACAGAC 1159 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTT 76270 | |||||| | |||||| ||||||| || |||| |||| || | | ||| | || Sbjct 1158 CAATTGGTATCGGTGTTTAAGGTCTTGCTGATGCCCTTATGCTTTTAAAGATAC-CCTTC 1100 Query 76271 GATTCAGATGA---AGCCAAGGAGATGAATGCTCGTA-TCTTTGAAACCATGTATCACGC 76326 || ||| || |||| | | | ||| | | | | ||||| ||||| ||||| || Sbjct 1099 GA---AGACGAAAGAGCCTATTAATTCAAT-CAAGAAGTATTTGAGACCATTTATCATGC 1044 Query 76327 ATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGG 76386 || || | | ||| ||| | || | |||||| |||||| | || || Sbjct 1043 TTCTATGTAATCCAGTGTTGACATCGCCAAGAAAGAAGGTTACTATGAATCTTTCATAGG 984 Query 76387 TTCTCC-CGC-GTCCCAAGGGGTGCTTC-AGTTTGATATGTGGGAAGGTGAAA---CCAA 76440 ||||| | | || |||| ||| | |||||||||| |||| | |||| |||| Sbjct 983 ATCTCCACTCAGT---TAGGGTATATTCTAATTTGATATGT-GGAACGAGAAATTGCCAA 928 Query 76441 GCTCAA--CTACGACTGGGATGTTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAA 76497 | |||| ||| | ||||| || ||| |||| | ||| | | ||| | || Sbjct 927 G-TCAAAGATACAATTGGGA-AAACTTAAGAAACGAGGTTAAGTAATACGGTGCCAGAAA 870 Query 76498 CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 76557 | ||| ||| | || || ||||| || || || || || |||| | || || ||||| Sbjct 869 CTCTCTATTGGTTGCCCCTATGCCTACCGCTTCAACTTCATAAATTCTAGGAAACAATGA 810 Query 76558 ATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGT 76617 | |||| ||||| ||||| || |||||||| |||||| | |||||||| || || Sbjct 809 AAGCTTCGAACCTTACACCACTAACATCTATACCAGAAGAGTGTTAGCAGGTGAATTCGT 750 >seq1421 Length=1529 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 64976 AAAAGAAGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAAT 65035 ||||||| | ||||| ||||| || ||| | | ||| | | || ||||| ||| Sbjct 782 AAAAGAAT-ATTTATTCAAAGCCGTCTAAAATATCCCAGTTGTCACTAAAAAGGCAGAAT 840 Query 65036 GGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTG 65095 ||||| ||| |||| ||| || || ||| |||| || | || |||| || | Sbjct 841 GGGCATTGAGATGGATTGGTGAAACAGCTAGCT---TCGCTGAAAGGCTAGTTGCTTTCG 897 Query 65096 CGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGC 65155 | | || |||||||| ||||| || || || ||||| | |||| ||| | ||||| | Sbjct 898 CTTCAGTTGAGGGTATATTCTTTTCTGGCTCTTTCTGTTCAATTTTCTGGCTCAAGAAAC 957 Query 65156 GGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCC 65215 | || ||||||||||| || |||||| ||||| || || || ||||||| ||| | | Sbjct 958 GTGGACTCATGCCAGGACTTACCTTCTCTAATGAGCTCATCTCTAGAGATGAAGGTATGC 1017 Query 65216 AC 65217 || Sbjct 1018 AC 1019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596410144403040