Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq1094 95.1 2e-14 seq9521 89.7 7e-13 >seq1094 Length=3744 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/148 (76%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 194246 AAATAGGGGATAAATTTTGTTCG--GGAATGGCTCAAAAAGGAACTTGTGGTATGATTTA 194303 ||||||| ||||||||| | | | || |||| | | || |||||||| ||||||| || Sbjct 815 AAATAGGAGATAAATTT-GCTAGTAGGCATGGAT-AGAAGGGAACTTGCGGTATGACATA 758 Query 194304 TTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAATCC 194363 | | | || ||| | |||||||| | |||||| ||||||||||| ||| ||||||| Sbjct 757 TAGATAGGAGGATTTACCATTTACTAGAGAAGGTATTGTACCAGATATGATTGTCAATCC 698 Query 194364 AAATTGTATTCCGTCCAGAATGACCATT 194391 || |||||| || |||||||| ||| Sbjct 697 CCATGCTATTCCTTCAAGAATGACTATT 670 >seq9521 Length=4824 Score = 89.7 bits (98), Expect = 7e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009 |||||||| ||| ||||| ||| ||| ||||||| |||| | |||| | |||||||| Sbjct 2250 ATTAAGGTGGCTTAATTATCTGGATATATTGCAGAGTAAACTGCTTATCATCATGGTGAG 2309 Query 166010 CAAAATTTATGTGAA--ACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATA 166067 | ||| | || ||||| || || | || |||||| ||||| | ||||| Sbjct 2310 ATGAGTTT--GCAAATGACTATTATAAATATGGCTTAAGATTACGTTGGAAGTAATAACC 2367 Query 166068 TAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 166127 || |||||| ||| |||||| |||||||| ||| | || ||||||||||||| Sbjct 2368 TAAACTTACTTATGCCTATTGGTCAGTTTGGTACAAGAATGATGGGTGGTAAAGATTCTG 2427 Query 166128 CTGCATCAAGATATATTTATACCAA 166152 | | |||||||| | |||||| Sbjct 2428 CAAGTCCTAGATATATATTTACCAA 2452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632320543436040