Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq6006 122 7e-23 seq16706 104 2e-17 seq19055 87.8 1e-12 >seq6006 Length=2920 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||| | ||||| ||||| ||||| || || || || ||||| |||| ||||| Sbjct 2818 AAAATGTAGATATTCGTCAAGACTTTGACGGGTAAGACTATTACTCTCGATGTCGAGCCC 2759 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||||| ||| | || || |||||| ||||||||||| | ||| ||| Sbjct 2758 TCTGATACCATCGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATCCCCCCCGAT 2699 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||||||||| || | ||| || || || |||| || | ||||| || | |||||| Sbjct 2698 CAACAAAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGGAAGAACCTTGTCTGATTAC 2639 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||||||||| || | ||| |||| |||||||| |||| || Sbjct 2638 AACATCCAAAAAGAATCAACTCTTCACTTGGTCTTAAGACTTAGAGGAGG 2589 >seq16706 Length=515 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| ||| | || || || |||||||| | || ||||| Sbjct 391 ATGCAAATCTTCGTCAAGACTCTTACTGGAAAGACCATTACTCTTGACGTTGAGCCATCT 332 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | || ||| |||||| ||||| ||||| | || |||||| Sbjct 331 GACACAATTGAAAACGTCAAAGCAAAGATTCAGGACAAGGAAGGTATCCCACCCGATCAA 272 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||||||||||| | ||| |||||||| || || |||| ||||| | | || |||||| Sbjct 271 CAAAGACTTATCTTTGCTGGTAAACAACTTGAAGATGGAAGAACTCTTTCAGACTACAAC 212 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || ||||| | ||| |||| || ||||| |||| || Sbjct 211 ATTCAGAAGGAGTCTACCCTTCACTTGGTCTTGAGACTCAGAGGAGG 165 >seq19055 Length=771 Score = 87.8 bits (96), Expect = 1e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 |||||||| |||||||||| || ||||| || || ||||| | ||||| | | || Sbjct 536 GATCAACAGAGACTTATTTTCGCCGGTAAGCAACTTGAGGACGGAAGAACCTTATCAGAC 477 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||||||||||||||| || | ||| |||| |||||||| |||| || Sbjct 476 TATAACATTCAAAAAGAATCCACTCTCCACTTGGTCTTAAGACTCAGAGGAGG 424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412734011285819