Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq19055 134 1e-26 seq6006 111 1e-19 >seq19055 Length=771 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| || || ||||||||||||||||||||||| || | | ||| | || || Sbjct 442 ACCAAGTGGAGAGTGGATTCTTTTTGAATGTTATAGTCTGATAAGGTTCTTCCGTCCTCA 501 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 ||||| || || || | || | ||| || ||||| || |||||||| || || ||||| Sbjct 502 AGTTGCTTACCGGCGAAAATAAGTCTCTGTTGATCGGGAGGAATACCTTCCTTATCTTGG 561 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | || |||||| |||| | ||||| || |||| || |||||||| || |||||| Sbjct 562 ATCTTAGCCTTGACATTTTCAATGGTGTCTGATGGTTCGACGTCAAGAGTGATGGTTTTG 621 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| ||||| || |||| ||| Sbjct 622 CCGGTTAAGGTCTTAACGAAGATCTACAT 650 >seq6006 Length=2920 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| ||||| || ||||||||||| ||||| ||||| | | ||| | || || Sbjct 2607 ACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAATCAGACAAGGTTCTTCCGTCTTCC 2666 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | | || |||||| | || | |||||| ||||| || || ||||| ||||||||||| Sbjct 2667 AACTACTTTCCAGCAAAGATGAGTCTTTGTTGATCGGGGGGGATACCTTCTTTGTCTTG- 2725 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | || || |||| | || ||||| | || || || ||||| ||||| || Sbjct 2726 AATCTTGGCCTTAACGTTTTCGATGGTATCAGAGGGCTCGACATCGAGAGTAATAGTCTT 2785 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || || ||||||| |||||| Sbjct 2786 ACCCGTCAAAGTCTTGACGAATATCTACATTTT 2818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385118809830003