Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq1094 82.4 1e-10 >seq1094 Length=3744 Score = 82.4 bits (90), Expect = 1e-10 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 193450 AAATAGGGGATAAATTTTGTTC-AGGAATGGCCCAAAAAGGAACTTGTGGTATGATTTAT 193508 ||||||| ||||||||| | ||| |||| | || |||||||| ||||||| ||| Sbjct 815 AAATAGGAGATAAATTTGCTAGTAGGCATGGAT-AGAAGGGAACTTGCGGTATGACATAT 757 Query 193509 TCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAATCCA 193568 | | || ||| | |||||||| |||||| ||||||||||| ||| | ||||| Sbjct 756 AGATAGGAGGATTTACCATTTACTAGAGAAGGTATTGTACCAGATATGATTGTCAATCCC 697 Query 193569 AATTGTATTCCATCCAGAATGACCATT 193595 || |||||| || |||||||| ||| Sbjct 696 CATGCTATTCCTTCAAGAATGACTATT 670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635007824967240