Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq9521 86.0 8e-12 seq1094 86.0 8e-12 >seq9521 Length=4824 Score = 86.0 bits (94), Expect = 8e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 ||||| || ||| ||||| ||| ||| ||||||| |||| | |||| | |||||||| Sbjct 2250 ATTAAGGTGGCTTAATTATCTGGATATATTGCAGAGTAAACTGCTTATCATCATGGTGAG 2309 Query 165220 CAAAATTTATGTGAA--ACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATA 165277 | ||| | || ||||| || || | || |||||| ||||| | ||||| Sbjct 2310 ATGAGTTT--GCAAATGACTATTATAAATATGGCTTAAGATTACGTTGGAAGTAATAACC 2367 Query 165278 TAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 165337 || |||||| ||| |||||| |||||||| ||| | || ||||||||||||| Sbjct 2368 TAAACTTACTTATGCCTATTGGTCAGTTTGGTACAAGAATGATGGGTGGTAAAGATTCTG 2427 Query 165338 CGGCATCAAGATATATTTATACCAA 165362 | | |||||||| | |||||| Sbjct 2428 CAAGTCCTAGATATATATTTACCAA 2452 >seq1094 Length=3744 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 193003 AAATAGGGGATAAATTTTGTTCG--GGAATGGCCCAAAAAGGAACTTGTGGTATGATTTA 193060 ||||||| ||||||||| | | | || |||| | || |||||||| ||||||| || Sbjct 815 AAATAGGAGATAAATTT-GCTAGTAGGCATGGAT-AGAAGGGAACTTGCGGTATGACATA 758 Query 193061 TTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATTAATCC 193120 | | | || ||| | |||||||| | |||||| ||||||||||| ||| | ||||| Sbjct 757 TAGATAGGAGGATTTACCATTTACTAGAGAAGGTATTGTACCAGATATGATTGTCAATCC 698 Query 193121 AAATTGTATTCCGTCCAGAATGACCATT 193148 || |||||| || |||||||| ||| Sbjct 697 CCATGCTATTCCTTCAAGAATGACTATT 670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628363201466880