Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laurentiella_20sp._20PUJRC_5FG5_20[genbank_20GCA_5F001272975.2_20201 5-12-23] 21,383 sequences; 49,041,502 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq19055 96.9 3e-15 seq17004 82.4 7e-11 >seq19055 Length=771 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| || ||||| || ||| |||| || | ||| || |||||||| || |||||||| Sbjct 495 GTCCTCAAGTTGCTTACCGGCGAAAATAAGTCTCTGTTGATCGGGAGGAATACCTTCCTT 554 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 || |||||| ||||| | |||| ||||| | || || ||||| | |||| Sbjct 555 ATCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCTGATGGTTCGACGTCAAGAGTGAT 614 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||||||| | || || ||||| |||| ||| Sbjct 615 GGTTTTGCCGGTTAAGGTCTTAACGAAGATCTACAT 650 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||| || || ||||| || |||||||| | | ||| | | |||||| | Sbjct 217 AAGTGGAGGGTTGATTCCTTCTGAATGTTGTAATCACTGA--GTGTTCTACCGTCCTCTA 274 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || ||| | || | | ||| || ||||||||||| ||||||||||| | Sbjct 275 ATTATTTACCAGCGAAGATCAATCTCTGTTGATCGGGAGGGATTCCTTCCTTGTCCTAAA 334 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| |||| | ||| | ||||| | || || ||||||| |||| ||| || | Sbjct 335 TCTTGGCTTTGACGTTCTCGATAGTGTCAGATGGTTCAACGTCGAGAGTGATGGTCTTAC 394 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| || |||||||| Sbjct 395 CGGTGAGGGTCTTTACAAAGATCTGCAT 422 >seq17004 Length=284 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 133539 TGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTG 133598 || || || |||||||| ||||||||||| |||||| ||| | | |||| ||| Sbjct 17 TGTTGATCAGGAGGGATACCTTCCTTGTCTTGGATCTTAGCCTTAACGTTTTCAATGGTG 76 Query 133599 TCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGC 133658 || | |||||| ||||| | ||||| |||||||| || || ||||| ||||| || | | Sbjct 77 TCAGAGGGCTCAACGTCCAAGGTGATAGTTTTGCCAGTAAGGGTTTTAACGAAGATTTAC 136 Query 133659 ATG 133661 ||| Sbjct 137 ATG 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483291587662920